These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

111 related articles for article (PubMed ID: 23633578)

  • 1. On the development of three new tools for organizing and sharing information in three-dimensional electron microscopy.
    Marabini R; Macias JR; Vargas J; Quintana A; Sorzano CO; Carazo JM
    Acta Crystallogr D Biol Crystallogr; 2013 May; 69(Pt 5):695-700. PubMed ID: 23633578
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy.
    de la Rosa-Trevín JM; Quintana A; Del Cano L; Zaldívar A; Foche I; Gutiérrez J; Gómez-Blanco J; Burguet-Castell J; Cuenca-Alba J; Abrishami V; Vargas J; Otón J; Sharov G; Vilas JL; Navas J; Conesa P; Kazemi M; Marabini R; Sorzano CO; Carazo JM
    J Struct Biol; 2016 Jul; 195(1):93-9. PubMed ID: 27108186
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The Electron Microscopy eXchange (EMX) initiative.
    Marabini R; Ludtke SJ; Murray SC; Chiu W; de la Rosa-Trevín JM; Patwardhan A; Heymann JB; Carazo JM
    J Struct Biol; 2016 May; 194(2):156-63. PubMed ID: 26873784
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Common conventions for interchange and archiving of three-dimensional electron microscopy information in structural biology.
    Heymann JB; Chagoyen M; Belnap DM
    J Struct Biol; 2005 Aug; 151(2):196-207. PubMed ID: 16043364
    [TBL] [Abstract][Full Text] [Related]  

  • 5. XMIPP: a new generation of an open-source image processing package for electron microscopy.
    Sorzano CO; Marabini R; Velázquez-Muriel J; Bilbao-Castro JR; Scheres SH; Carazo JM; Pascual-Montano A
    J Struct Biol; 2004 Nov; 148(2):194-204. PubMed ID: 15477099
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Bsoft: image processing and molecular modeling for electron microscopy.
    Heymann JB; Belnap DM
    J Struct Biol; 2007 Jan; 157(1):3-18. PubMed ID: 17011211
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Bsoft: image and molecular processing in electron microscopy.
    Heymann JB
    J Struct Biol; 2001; 133(2-3):156-69. PubMed ID: 11472087
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Three-dimensional reconstruction of single particles in electron microscopy image processing.
    Radermacher M; Ruiz T
    Methods Mol Biol; 2006; 319():427-61. PubMed ID: 16719367
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Novel convergence-oriented approach for evaluation and optimization of workflow in single-particle two-dimensional averaging of electron microscope images.
    Moriya T; Mio K; Sato C
    Microscopy (Oxf); 2013; 62(5):491-513. PubMed ID: 23625506
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Flexible workflows for on-the-fly electron-microscopy single-particle image processing using Scipion.
    Maluenda D; Majtner T; Horvath P; Vilas JL; Jiménez-Moreno A; Mota J; Ramírez-Aportela E; Sánchez-García R; Conesa P; Del Caño L; Rancel Y; Fonseca Y; Martínez M; Sharov G; García CA; Strelak D; Melero R; Marabini R; Carazo JM; Sorzano COS
    Acta Crystallogr D Struct Biol; 2019 Oct; 75(Pt 10):882-894. PubMed ID: 31588920
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Collaborative EM image processing with the IPLT image processing library and toolbox.
    Philippsen A; Schenk AD; Signorell GA; Mariani V; Berneche S; Engel A
    J Struct Biol; 2007 Jan; 157(1):28-37. PubMed ID: 16919967
    [TBL] [Abstract][Full Text] [Related]  

  • 12. EMAN2: an extensible image processing suite for electron microscopy.
    Tang G; Peng L; Baldwin PR; Mann DS; Jiang W; Rees I; Ludtke SJ
    J Struct Biol; 2007 Jan; 157(1):38-46. PubMed ID: 16859925
    [TBL] [Abstract][Full Text] [Related]  

  • 13. QVIEW: software for rapid selection of particles from digital electron micrographs.
    Shah AK; Stewart PL
    J Struct Biol; 1998 Sep; 123(1):17-21. PubMed ID: 9774540
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Scipion web tools: Easy to use cryo-EM image processing over the web.
    Conesa Mingo P; Gutierrez J; Quintana A; de la Rosa Trevín JM; Zaldívar-Peraza A; Cuenca Alba J; Kazemi M; Vargas J; Del Cano L; Segura J; Sorzano COS; Carazo JM
    Protein Sci; 2018 Jan; 27(1):269-275. PubMed ID: 28971542
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Scipion Flexibility Hub: an integrative framework for advanced analysis of conformational heterogeneity in cryoEM.
    Herreros D; Krieger JM; Fonseca Y; Conesa P; Harastani M; Vuillemot R; Hamitouche I; Serrano Gutiérrez R; Gragera M; Melero R; Jonic S; Carazo JM; Sorzano COS
    Acta Crystallogr D Struct Biol; 2023 Jul; 79(Pt 7):569-584. PubMed ID: 37326585
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A method for estimating the CTF in electron microscopy based on ARMA models and parameter adjustment.
    Velázquez-Muriel JA; Sorzano CO; Fernández JJ; Carazo JM
    Ultramicroscopy; 2003 Jul; 96(1):17-35. PubMed ID: 12623169
    [TBL] [Abstract][Full Text] [Related]  

  • 17. 2dx--user-friendly image processing for 2D crystals.
    Gipson B; Zeng X; Zhang ZY; Stahlberg H
    J Struct Biol; 2007 Jan; 157(1):64-72. PubMed ID: 17055742
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Three-dimensional reconstruction from reduced sets of very noisy images acquired following a single-axis tilt schema: application of a new three-dimensional reconstruction algorithm and objective comparison with weighted backprojection.
    Marabini R; Rietzel E; Schroeder R; Herman GT; Carazo JM
    J Struct Biol; 1997 Dec; 120(3):363-71. PubMed ID: 9441939
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Tinkerbell--a tool for interactive segmentation of 3D data.
    Li Y; Leith A; Frank J
    J Struct Biol; 1997 Dec; 120(3):266-75. PubMed ID: 9441932
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Introduction to 3D reconstruction of macromolecules using single particle electron microscopy.
    Llorca O
    Acta Pharmacol Sin; 2005 Oct; 26(10):1153-64. PubMed ID: 16174429
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.