274 related articles for article (PubMed ID: 23667399)
1. eQTL Mapping Using RNA-seq Data.
Sun W; Hu Y
Stat Biosci; 2013 May; 5(1):198-219. PubMed ID: 23667399
[TBL] [Abstract][Full Text] [Related]
2. A statistical framework for eQTL mapping using RNA-seq data.
Sun W
Biometrics; 2012 Mar; 68(1):1-11. PubMed ID: 21838806
[TBL] [Abstract][Full Text] [Related]
3. Proper Use of Allele-Specific Expression Improves Statistical Power for
Hu YJ; Sun W; Tzeng JY; Perou CM
J Am Stat Assoc; 2015; 110(511):962-974. PubMed ID: 26568645
[TBL] [Abstract][Full Text] [Related]
4. Comparing allele specific expression and local expression quantitative trait loci and the influence of gene expression on complex trait variation in cattle.
Khansefid M; Pryce JE; Bolormaa S; Chen Y; Millen CA; Chamberlain AJ; Vander Jagt CJ; Goddard ME
BMC Genomics; 2018 Nov; 19(1):793. PubMed ID: 30390624
[TBL] [Abstract][Full Text] [Related]
5. Powerful identification of cis-regulatory SNPs in human primary monocytes using allele-specific gene expression.
Almlöf JC; Lundmark P; Lundmark A; Ge B; Maouche S; Göring HH; Liljedahl U; Enström C; Brocheton J; Proust C; Godefroy T; Sambrook JG; Jolley J; Crisp-Hihn A; Foad N; Lloyd-Jones H; Stephens J; Gwilliam R; Rice CM; Hengstenberg C; Samani NJ; Erdmann J; Schunkert H; Pastinen T; Deloukas P; Goodall AH; Ouwehand WH; Cambien F; Syvänen AC
PLoS One; 2012; 7(12):e52260. PubMed ID: 23300628
[TBL] [Abstract][Full Text] [Related]
6. Mapping Tumor-Specific Expression QTLs in Impure Tumor Samples.
Wilson DR; Ibrahim JG; Sun W
J Am Stat Assoc; 2020; 115(529):79-89. PubMed ID: 32773912
[TBL] [Abstract][Full Text] [Related]
7. Allelic mapping bias in RNA-sequencing is not a major confounder in eQTL studies.
Panousis NI; Gutierrez-Arcelus M; Dermitzakis ET; Lappalainen T
Genome Biol; 2014 Sep; 15(9):467. PubMed ID: 25239376
[TBL] [Abstract][Full Text] [Related]
8. Calling genotypes from public RNA-sequencing data enables identification of genetic variants that affect gene-expression levels.
Deelen P; Zhernakova DV; de Haan M; van der Sijde M; Bonder MJ; Karjalainen J; van der Velde KJ; Abbott KM; Fu J; Wijmenga C; Sinke RJ; Swertz MA; Franke L
Genome Med; 2015; 7(1):30. PubMed ID: 25954321
[TBL] [Abstract][Full Text] [Related]
9. ASEP: Gene-based detection of allele-specific expression across individuals in a population by RNA sequencing.
Fan J; Hu J; Xue C; Zhang H; Susztak K; Reilly MP; Xiao R; Li M
PLoS Genet; 2020 May; 16(5):e1008786. PubMed ID: 32392242
[TBL] [Abstract][Full Text] [Related]
10. Expression quantitative trait locus studies in the era of single-cell omics.
Luo J; Wu X; Cheng Y; Chen G; Wang J; Song X
Front Genet; 2023; 14():1182579. PubMed ID: 37284065
[TBL] [Abstract][Full Text] [Related]
11. Deciphering the genetic regulation of peripheral blood transcriptome in pigs through expression genome-wide association study and allele-specific expression analysis.
Maroilley T; Lemonnier G; Lecardonnel J; Esquerré D; Ramayo-Caldas Y; Mercat MJ; Rogel-Gaillard C; Estellé J
BMC Genomics; 2017 Dec; 18(1):967. PubMed ID: 29237423
[TBL] [Abstract][Full Text] [Related]
12. The Power of Single-Cell RNA Sequencing in eQTL Discovery.
Maria M; Pouyanfar N; Örd T; Kaikkonen MU
Genes (Basel); 2022 Mar; 13(3):. PubMed ID: 35328055
[TBL] [Abstract][Full Text] [Related]
13. A computational method for cell type-specific expression quantitative trait loci mapping using bulk RNA-seq data.
Little P; Liu S; Zhabotynsky V; Li Y; Lin DY; Sun W
Nat Commun; 2023 May; 14(1):3030. PubMed ID: 37231002
[TBL] [Abstract][Full Text] [Related]
14. Genome-wide analysis of expression QTL (eQTL) and allele-specific expression (ASE) in pig muscle identifies candidate genes for meat quality traits.
Liu Y; Liu X; Zheng Z; Ma T; Liu Y; Long H; Cheng H; Fang M; Gong J; Li X; Zhao S; Xu X
Genet Sel Evol; 2020 Oct; 52(1):59. PubMed ID: 33036552
[TBL] [Abstract][Full Text] [Related]
15. Allele-specific expression and eQTL analysis in mouse adipose tissue.
Hasin-Brumshtein Y; Hormozdiari F; Martin L; van Nas A; Eskin E; Lusis AJ; Drake TA
BMC Genomics; 2014 Jun; 15(1):471. PubMed ID: 24927774
[TBL] [Abstract][Full Text] [Related]
16. Strategies for eQTL mapping in allopolyploid organisms.
Fan KH; Devos KM; Schliekelman P
Theor Appl Genet; 2020 Aug; 133(8):2477-2497. PubMed ID: 32462429
[TBL] [Abstract][Full Text] [Related]
17. Mapping of promoter usage QTL using RNA-seq data reveals their contributions to complex traits.
Kubota N; Suyama M
PLoS Comput Biol; 2022 Aug; 18(8):e1010436. PubMed ID: 36037215
[TBL] [Abstract][Full Text] [Related]
18. Discovering Single Nucleotide Polymorphisms Regulating Human Gene Expression Using Allele Specific Expression from RNA-seq Data.
Kang EY; Martin LJ; Mangul S; Isvilanonda W; Zou J; Ben-David E; Han B; Lusis AJ; Shifman S; Eskin E
Genetics; 2016 Nov; 204(3):1057-1064. PubMed ID: 27765809
[TBL] [Abstract][Full Text] [Related]
19. Trait correlated expression combined with eQTL and ASE analyses identified novel candidate genes affecting intramuscular fat.
Liu Y; Long H; Feng S; Ma T; Wang M; Niu L; Zhang X; Wang L; Lei Y; Chen Y; Wang Q; Xu X
BMC Genomics; 2021 Nov; 22(1):805. PubMed ID: 34749647
[TBL] [Abstract][Full Text] [Related]
20. A systematic comparison of normalization methods for eQTL analysis.
Yang J; Wang D; Yang Y; Yang W; Jin W; Niu X; Gong J
Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34015824
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
