These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

220 related articles for article (PubMed ID: 23667655)

  • 21. Meraculous: de novo genome assembly with short paired-end reads.
    Chapman JA; Ho I; Sunkara S; Luo S; Schroth GP; Rokhsar DS
    PLoS One; 2011; 6(8):e23501. PubMed ID: 21876754
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Comparison of different sequencing and assembly strategies for a repeat-rich fungal genome, Ophiocordyceps sinensis.
    Li Y; Hsiang T; Yang RH; Hu XD; Wang K; Wang WJ; Wang XL; Jiao L; Yao YJ
    J Microbiol Methods; 2016 Sep; 128():1-6. PubMed ID: 27343682
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Evaluating Illumina-, Nanopore-, and PacBio-based genome assembly strategies with the bald notothen, Trematomus borchgrevinki.
    Rayamajhi N; Cheng CC; Catchen JM
    G3 (Bethesda); 2022 Nov; 12(11):. PubMed ID: 35904764
    [TBL] [Abstract][Full Text] [Related]  

  • 24. De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae.
    Reinhardt JA; Baltrus DA; Nishimura MT; Jeck WR; Jones CD; Dangl JL
    Genome Res; 2009 Feb; 19(2):294-305. PubMed ID: 19015323
    [TBL] [Abstract][Full Text] [Related]  

  • 25. De novo assembly of the Indian blue peacock (Pavo cristatus) genome using Oxford Nanopore technology and Illumina sequencing.
    Dhar R; Seethy A; Pethusamy K; Singh S; Rohil V; Purkayastha K; Mukherjee I; Goswami S; Singh R; Raj A; Srivastava T; Acharya S; Rajashekhar B; Karmakar S
    Gigascience; 2019 May; 8(5):. PubMed ID: 31077316
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Identification of optimum sequencing depth especially for de novo genome assembly of small genomes using next generation sequencing data.
    Desai A; Marwah VS; Yadav A; Jha V; Dhaygude K; Bangar U; Kulkarni V; Jere A
    PLoS One; 2013; 8(4):e60204. PubMed ID: 23593174
    [TBL] [Abstract][Full Text] [Related]  

  • 27. De novo assembly of Dekkera bruxellensis: a multi technology approach using short and long-read sequencing and optical mapping.
    Olsen RA; Bunikis I; Tiukova I; Holmberg K; Lötstedt B; Pettersson OV; Passoth V; Käller M; Vezzi F
    Gigascience; 2015; 4():56. PubMed ID: 26617983
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Evaluation of nine popular de novo assemblers in microbial genome assembly.
    Forouzan E; Maleki MSM; Karkhane AA; Yakhchali B
    J Microbiol Methods; 2017 Dec; 143():32-37. PubMed ID: 28939423
    [TBL] [Abstract][Full Text] [Related]  

  • 29. A comprehensive investigation of metagenome assembly by linked-read sequencing.
    Zhang L; Fang X; Liao H; Zhang Z; Zhou X; Han L; Chen Y; Qiu Q; Li SC
    Microbiome; 2020 Nov; 8(1):156. PubMed ID: 33176883
    [TBL] [Abstract][Full Text] [Related]  

  • 30. HGA: de novo genome assembly method for bacterial genomes using high coverage short sequencing reads.
    Al-Okaily AA
    BMC Genomics; 2016 Mar; 17():193. PubMed ID: 26945881
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Highly accurate long reads are crucial for realizing the potential of biodiversity genomics.
    Hotaling S; Wilcox ER; Heckenhauer J; Stewart RJ; Frandsen PB
    BMC Genomics; 2023 Mar; 24(1):117. PubMed ID: 36927511
    [TBL] [Abstract][Full Text] [Related]  

  • 32. The genome of flax (Linum usitatissimum) assembled de novo from short shotgun sequence reads.
    Wang Z; Hobson N; Galindo L; Zhu S; Shi D; McDill J; Yang L; Hawkins S; Neutelings G; Datla R; Lambert G; Galbraith DW; Grassa CJ; Geraldes A; Cronk QC; Cullis C; Dash PK; Kumar PA; Cloutier S; Sharpe AG; Wong GK; Wang J; Deyholos MK
    Plant J; 2012 Nov; 72(3):461-73. PubMed ID: 22757964
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Genome Characterization of Oleaginous Aspergillus oryzae BCC7051: A Potential Fungal-Based Platform for Lipid Production.
    Thammarongtham C; Nookaew I; Vorapreeda T; Srisuk T; Land ML; Jeennor S; Laoteng K
    Curr Microbiol; 2018 Jan; 75(1):57-70. PubMed ID: 28865010
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis.
    Baeza JA; García-De León FJ
    BMC Genomics; 2022 Apr; 23(1):320. PubMed ID: 35459089
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Illumina mate-paired DNA sequencing-library preparation using Cre-Lox recombination.
    Van Nieuwerburgh F; Thompson RC; Ledesma J; Deforce D; Gaasterland T; Ordoukhanian P; Head SR
    Nucleic Acids Res; 2012 Feb; 40(3):e24. PubMed ID: 22127871
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Comparison of De Novo Assembly Strategies for Bacterial Genomes.
    Zhang P; Jiang D; Wang Y; Yao X; Luo Y; Yang Z
    Int J Mol Sci; 2021 Jul; 22(14):. PubMed ID: 34299288
    [TBL] [Abstract][Full Text] [Related]  

  • 37. De novo assembly of short sequence reads.
    Paszkiewicz K; Studholme DJ
    Brief Bioinform; 2010 Sep; 11(5):457-72. PubMed ID: 20724458
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Preparing Mate-Paired Illumina Libraries Using Cre Recombinase.
    Peng Z; Nath N; Zhao Z; Froula JL; Cheng JF; Chen F
    Methods Mol Biol; 2017; 1642():247-261. PubMed ID: 28815505
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Short-read sequencing for genomic analysis of the brown rot fungus Fibroporia radiculosa.
    Tang JD; Perkins AD; Sonstegard TS; Schroeder SG; Burgess SC; Diehl SV
    Appl Environ Microbiol; 2012 Apr; 78(7):2272-81. PubMed ID: 22247176
    [TBL] [Abstract][Full Text] [Related]  

  • 40. BASE: a practical de novo assembler for large genomes using long NGS reads.
    Liu B; Liu CM; Li D; Li Y; Ting HF; Yiu SM; Luo R; Lam TW
    BMC Genomics; 2016 Aug; 17 Suppl 5(Suppl 5):499. PubMed ID: 27586129
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.