These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
252 related articles for article (PubMed ID: 23671339)
41. High-throughput cis-regulatory element discovery in the vector mosquito Aedes aegypti. Behura SK; Sarro J; Li P; Mysore K; Severson DW; Emrich SJ; Duman-Scheel M BMC Genomics; 2016 May; 17():341. PubMed ID: 27161480 [TBL] [Abstract][Full Text] [Related]
42. systemPipeR: NGS workflow and report generation environment. H Backman TW; Girke T BMC Bioinformatics; 2016 Sep; 17():388. PubMed ID: 27650223 [TBL] [Abstract][Full Text] [Related]
43. GenomeView: a next-generation genome browser. Abeel T; Van Parys T; Saeys Y; Galagan J; Van de Peer Y Nucleic Acids Res; 2012 Jan; 40(2):e12. PubMed ID: 22102585 [TBL] [Abstract][Full Text] [Related]
44. The three 'C' s of chromosome conformation capture: controls, controls, controls. Dekker J Nat Methods; 2006 Jan; 3(1):17-21. PubMed ID: 16369547 [TBL] [Abstract][Full Text] [Related]
45. Pgltools: a genomic arithmetic tool suite for manipulation of Hi-C peak and other chromatin interaction data. Greenwald WW; Li H; Smith EN; Benaglio P; Nariai N; Frazer KA BMC Bioinformatics; 2017 Apr; 18(1):207. PubMed ID: 28388874 [TBL] [Abstract][Full Text] [Related]
46. GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data. Harmston N; Ing-Simmons E; Perry M; Barešić A; Lenhard B BMC Genomics; 2015 Nov; 16():963. PubMed ID: 26576536 [TBL] [Abstract][Full Text] [Related]
47. ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data. Zhu LJ; Gazin C; Lawson ND; Pagès H; Lin SM; Lapointe DS; Green MR BMC Bioinformatics; 2010 May; 11():237. PubMed ID: 20459804 [TBL] [Abstract][Full Text] [Related]
53. Assessment of 3D Interactions Between Promoters and Distal Regulatory Elements with Promoter Capture Hi-C (PCHi-C). Karasu N; Sexton T Methods Mol Biol; 2021; 2351():229-248. PubMed ID: 34382193 [TBL] [Abstract][Full Text] [Related]
54. Microfluidics-Based Chromosome Conformation Capture (3C) Technology for Examining Chromatin Organization with a Low Quantity of Cells. Sun C; Lu C Anal Chem; 2018 Mar; 90(6):3714-3719. PubMed ID: 29498513 [TBL] [Abstract][Full Text] [Related]
55. TrawlerWeb: an online de novo motif discovery tool for next-generation sequencing datasets. Dang LT; Tondl M; Chiu MHH; Revote J; Paten B; Tano V; Tokolyi A; Besse F; Quaife-Ryan G; Cumming H; Drvodelic MJ; Eichenlaub MP; Hallab JC; Stolper JS; Rossello FJ; Bogoyevitch MA; Jans DA; Nim HT; Porrello ER; Hudson JE; Ramialison M BMC Genomics; 2018 Apr; 19(1):238. PubMed ID: 29621972 [TBL] [Abstract][Full Text] [Related]
59. Analysis of ChIP-seq Data in R/Bioconductor. de Santiago I; Carroll T Methods Mol Biol; 2018; 1689():195-226. PubMed ID: 29027176 [TBL] [Abstract][Full Text] [Related]
60. Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data. Wang B; Cunningham JM; Yang XH Bioinformatics; 2015 Sep; 31(18):3043-5. PubMed ID: 25979472 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]