These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 23672344)

  • 1. MIMO: an efficient tool for molecular interaction maps overlap.
    Di Lena P; Wu G; Martelli PL; Casadio R; Nardini C
    BMC Bioinformatics; 2013 May; 14():159. PubMed ID: 23672344
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Algorithms for effective querying of compound graph-based pathway databases.
    Dogrusoz U; Cetintas A; Demir E; Babur O
    BMC Bioinformatics; 2009 Nov; 10():376. PubMed ID: 19917102
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Reactome graph database: Efficient access to complex pathway data.
    Fabregat A; Korninger F; Viteri G; Sidiropoulos K; Marin-Garcia P; Ping P; Wu G; Stein L; D'Eustachio P; Hermjakob H
    PLoS Comput Biol; 2018 Jan; 14(1):e1005968. PubMed ID: 29377902
    [TBL] [Abstract][Full Text] [Related]  

  • 4. STON: exploring biological pathways using the SBGN standard and graph databases.
    Touré V; Mazein A; Waltemath D; Balaur I; Saqi M; Henkel R; Pellet J; Auffray C
    BMC Bioinformatics; 2016 Dec; 17(1):494. PubMed ID: 27919219
    [TBL] [Abstract][Full Text] [Related]  

  • 5. BiNoM 2.0, a Cytoscape plugin for accessing and analyzing pathways using standard systems biology formats.
    Bonnet E; Calzone L; Rovera D; Stoll G; Barillot E; Zinovyev A
    BMC Syst Biol; 2013 Mar; 7():18. PubMed ID: 23453054
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SAGA: a subgraph matching tool for biological graphs.
    Tian Y; McEachin RC; Santos C; States DJ; Patel JM
    Bioinformatics; 2007 Jan; 23(2):232-9. PubMed ID: 17110368
    [TBL] [Abstract][Full Text] [Related]  

  • 7. neo4jsbml: import systems biology markup language data into the graph database Neo4j.
    Gricourt G; Duigou T; Dérozier S; Faulon JL
    PeerJ; 2024; 12():e16726. PubMed ID: 38250720
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Recon2Neo4j: applying graph database technologies for managing comprehensive genome-scale networks.
    Balaur I; Mazein A; Saqi M; Lysenko A; Rawlings CJ; Auffray C
    Bioinformatics; 2017 Apr; 33(7):1096-1098. PubMed ID: 27993779
    [TBL] [Abstract][Full Text] [Related]  

  • 9. An editor for pathway drawing and data visualization in the Biopathways Workbench.
    Byrnes RW; Cotter D; Maer A; Li J; Nadeau D; Subramaniam S
    BMC Syst Biol; 2009 Oct; 3():99. PubMed ID: 19799790
    [TBL] [Abstract][Full Text] [Related]  

  • 10. ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining.
    Huan T; Sivachenko AY; Harrison SH; Chen JY
    BMC Bioinformatics; 2008 Aug; 9 Suppl 9(Suppl 9):S5. PubMed ID: 18793469
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Biological Network Inference and analysis using SEBINI and CABIN.
    Taylor R; Singhal M
    Methods Mol Biol; 2009; 541():551-76. PubMed ID: 19381531
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Interleukins and their signaling pathways in the Reactome biological pathway database.
    Jupe S; Ray K; Roca CD; Varusai T; Shamovsky V; Stein L; D'Eustachio P; Hermjakob H
    J Allergy Clin Immunol; 2018 Apr; 141(4):1411-1416. PubMed ID: 29378288
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Metabolic network visualization eliminating node redundance and preserving metabolic pathways.
    Bourqui R; Cottret L; Lacroix V; Auber D; Mary P; Sagot MF; Jourdan F
    BMC Syst Biol; 2007 Jul; 1():29. PubMed ID: 17608928
    [TBL] [Abstract][Full Text] [Related]  

  • 14. KEGGconverter: a tool for the in-silico modelling of metabolic networks of the KEGG Pathways database.
    Moutselos K; Kanaris I; Chatziioannou A; Maglogiannis I; Kolisis FN
    BMC Bioinformatics; 2009 Oct; 10():324. PubMed ID: 19814801
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Reconn: a cytoscape plug-in for exploring and visualizing reactome.
    Ligtenberg WP; Bošnački D; Hilbers PA
    J Bioinform Comput Biol; 2013 Aug; 11(4):1350004. PubMed ID: 23859268
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PathRings: a web-based tool for exploration of ortholog and expression data in biological pathways.
    Zhu Y; Sun L; Garbarino A; Schmidt C; Fang J; Chen J
    BMC Bioinformatics; 2015 May; 16(1):165. PubMed ID: 25982732
    [TBL] [Abstract][Full Text] [Related]  

  • 17. BioPP: a tool for web-publication of biological networks.
    Viswanathan GA; Nudelman G; Patil S; Sealfon SC
    BMC Bioinformatics; 2007 May; 8():168. PubMed ID: 17519033
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SBML-PET: a Systems Biology Markup Language-based parameter estimation tool.
    Zi Z; Klipp E
    Bioinformatics; 2006 Nov; 22(21):2704-5. PubMed ID: 16926221
    [TBL] [Abstract][Full Text] [Related]  

  • 19. METANNOGEN: compiling features of biochemical reactions needed for the reconstruction of metabolic networks.
    Gille C; Hoffmann S; Holzhütter HG
    BMC Syst Biol; 2007 Jan; 1():5. PubMed ID: 17408512
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Pandora, a pathway and network discovery approach based on common biological evidence.
    Zhang KX; Ouellette BF
    Bioinformatics; 2010 Feb; 26(4):529-35. PubMed ID: 20031970
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.