These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

216 related articles for article (PubMed ID: 23677617)

  • 1. SGAtools: one-stop analysis and visualization of array-based genetic interaction screens.
    Wagih O; Usaj M; Baryshnikova A; VanderSluis B; Kuzmin E; Costanzo M; Myers CL; Andrews BJ; Boone CM; Parts L
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W591-6. PubMed ID: 23677617
    [TBL] [Abstract][Full Text] [Related]  

  • 2. τ-SGA: synthetic genetic array analysis for systematically screening and quantifying trigenic interactions in yeast.
    Kuzmin E; Rahman M; VanderSluis B; Costanzo M; Myers CL; Andrews BJ; Boone C
    Nat Protoc; 2021 Feb; 16(2):1219-1250. PubMed ID: 33462440
    [TBL] [Abstract][Full Text] [Related]  

  • 3. gitter: a robust and accurate method for quantification of colony sizes from plate images.
    Wagih O; Parts L
    G3 (Bethesda); 2014 Mar; 4(3):547-52. PubMed ID: 24474170
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Balony: a software package for analysis of data generated by synthetic genetic array experiments.
    Young BP; Loewen CJ
    BMC Bioinformatics; 2013 Dec; 14():354. PubMed ID: 24305553
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genome-Wide Quantitative Fitness Analysis (QFA) of Yeast Cultures.
    Holstein EM; Lawless C; Banks P; Lydall D
    Methods Mol Biol; 2018; 1672():575-597. PubMed ID: 29043649
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Array-based synthetic genetic screens to map bacterial pathways and functional networks in Escherichia coli.
    Babu M; Gagarinova A; Greenblatt J; Emili A
    Methods Mol Biol; 2011; 765():125-53. PubMed ID: 21815091
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Array-based synthetic genetic screens to map bacterial pathways and functional networks in Escherichia coli.
    Babu M; Gagarinova A; Emili A
    Methods Mol Biol; 2011; 781():99-126. PubMed ID: 21877280
    [TBL] [Abstract][Full Text] [Related]  

  • 8. TOPS: a versatile software tool for statistical analysis and visualization of combinatorial gene-gene and gene-drug interaction screens.
    Muellner MK; Duernberger G; Ganglberger F; Kerzendorfer C; Uras IZ; Schoenegger A; Bagienski K; Colinge J; Nijman SM
    BMC Bioinformatics; 2014 Apr; 15():98. PubMed ID: 24712852
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Quantitative analysis of fitness and genetic interactions in yeast on a genome scale.
    Baryshnikova A; Costanzo M; Kim Y; Ding H; Koh J; Toufighi K; Youn JY; Ou J; San Luis BJ; Bandyopadhyay S; Hibbs M; Hess D; Gingras AC; Bader GD; Troyanskaya OG; Brown GW; Andrews B; Boone C; Myers CL
    Nat Methods; 2010 Dec; 7(12):1017-24. PubMed ID: 21076421
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Synthetic genetic array analysis for global mapping of genetic networks in yeast.
    Kuzmin E; Sharifpoor S; Baryshnikova A; Costanzo M; Myers CL; Andrews BJ; Boone C
    Methods Mol Biol; 2014; 1205():143-68. PubMed ID: 25213244
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Synthetic Genetic Array Analysis.
    Kuzmin E; Costanzo M; Andrews B; Boone C
    Cold Spring Harb Protoc; 2016 Apr; 2016(4):pdb.prot088807. PubMed ID: 27037072
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Quantitative analysis of colony morphology in yeast.
    Ruusuvuori P; Lin J; Scott AC; Tan Z; Sorsa S; Kallio A; Nykter M; Yli-Harja O; Shmulevich I; Dudley AM
    Biotechniques; 2014 Jan; 56(1):18-27. PubMed ID: 24447135
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Gene Expression Browser: large-scale and cross-experiment microarray data integration, management, search & visualization.
    Zhang M; Zhang Y; Liu L; Yu L; Tsang S; Tan J; Yao W; Kang MS; An Y; Fan X
    BMC Bioinformatics; 2010 Aug; 11():433. PubMed ID: 20727159
    [TBL] [Abstract][Full Text] [Related]  

  • 14. DRYGIN: a database of quantitative genetic interaction networks in yeast.
    Koh JL; Ding H; Costanzo M; Baryshnikova A; Toufighi K; Bader GD; Myers CL; Andrews BJ; Boone C
    Nucleic Acids Res; 2010 Jan; 38(Database issue):D502-7. PubMed ID: 19880385
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Accurate, precise modeling of cell proliferation kinetics from time-lapse imaging and automated image analysis of agar yeast culture arrays.
    Shah NA; Laws RJ; Wardman B; Zhao LP; Hartman JL
    BMC Syst Biol; 2007 Jan; 1():3. PubMed ID: 17408510
    [TBL] [Abstract][Full Text] [Related]  

  • 16.
    Kamrad S; Rodríguez-López M; Cotobal C; Correia-Melo C; Ralser M; Bähler J
    Elife; 2020 Jun; 9():. PubMed ID: 32543370
    [TBL] [Abstract][Full Text] [Related]  

  • 17. PROPHECY--a database for high-resolution phenomics.
    Fernandez-Ricaud L; Warringer J; Ericson E; Pylvänäinen I; Kemp GJ; Nerman O; Blomberg A
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D369-73. PubMed ID: 15608218
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Synthetic genetic array (SGA) analysis in Saccharomyces cerevisiae and Schizosaccharomyces pombe.
    Baryshnikova A; Costanzo M; Dixon S; Vizeacoumar FJ; Myers CL; Andrews B; Boone C
    Methods Enzymol; 2010; 470():145-79. PubMed ID: 20946810
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Web-based interactive 2D/3D medical image processing and visualization software.
    Mahmoudi SE; Akhondi-Asl A; Rahmani R; Faghih-Roohi S; Taimouri V; Sabouri A; Soltanian-Zadeh H
    Comput Methods Programs Biomed; 2010 May; 98(2):172-82. PubMed ID: 20022133
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Phenomic assessment of genetic buffering by kinetic analysis of cell arrays.
    Rodgers J; Guo J; Hartman JL
    Methods Mol Biol; 2014; 1205():187-208. PubMed ID: 25213246
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.