These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

134 related articles for article (PubMed ID: 23697330)

  • 1. Learning smoothing models of copy number profiles using breakpoint annotations.
    Hocking TD; Schleiermacher G; Janoueix-Lerosey I; Boeva V; Cappo J; Delattre O; Bach F; Vert JP
    BMC Bioinformatics; 2013 May; 14():164. PubMed ID: 23697330
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A segmental maximum a posteriori approach to genome-wide copy number profiling.
    Andersson R; Bruder CE; Piotrowski A; Menzel U; Nord H; Sandgren J; Hvidsten TR; Diaz de Ståhl T; Dumanski JP; Komorowski J
    Bioinformatics; 2008 Mar; 24(6):751-8. PubMed ID: 18204059
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Breakpoint identification and smoothing of array comparative genomic hybridization data.
    Jong K; Marchiori E; Meijer G; Vaart AV; Ylstra B
    Bioinformatics; 2004 Dec; 20(18):3636-7. PubMed ID: 15201182
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Quantile smoothing of array CGH data.
    Eilers PH; de Menezes RX
    Bioinformatics; 2005 Apr; 21(7):1146-53. PubMed ID: 15572474
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Detection of DNA copy number alterations using penalized least squares regression.
    Huang T; Wu B; Lizardi P; Zhao H
    Bioinformatics; 2005 Oct; 21(20):3811-7. PubMed ID: 16131523
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Sparse representation and Bayesian detection of genome copy number alterations from microarray data.
    Pique-Regi R; Monso-Varona J; Ortega A; Seeger RC; Triche TJ; Asgharzadeh S
    Bioinformatics; 2008 Feb; 24(3):309-18. PubMed ID: 18203770
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Improving genome annotations using phylogenetic profile anomaly detection.
    Mikkelsen TS; Galagan JE; Mesirov JP
    Bioinformatics; 2005 Feb; 21(4):464-70. PubMed ID: 15374867
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detection of low level genomic alterations by comparative genomic hybridization based on cDNA micro-arrays.
    Bilke S; Chen QR; Whiteford CC; Khan J
    Bioinformatics; 2005 Apr; 21(7):1138-45. PubMed ID: 15539449
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genomic Copy Number Profiling Using Circulating Free Tumor DNA Highlights Heterogeneity in Neuroblastoma.
    Chicard M; Boyault S; Colmet Daage L; Richer W; Gentien D; Pierron G; Lapouble E; Bellini A; Clement N; Iacono I; Bréjon S; Carrere M; Reyes C; Hocking T; Bernard V; Peuchmaur M; Corradini N; Faure-Conter C; Coze C; Plantaz D; Defachelles AS; Thebaud E; Gambart M; Millot F; Valteau-Couanet D; Michon J; Puisieux A; Delattre O; Combaret V; Schleiermacher G
    Clin Cancer Res; 2016 Nov; 22(22):5564-5573. PubMed ID: 27440268
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Accurate detection of aneuploidies in array CGH and gene expression microarray data.
    Myers CL; Dunham MJ; Kung SY; Troyanskaya OG
    Bioinformatics; 2004 Dec; 20(18):3533-43. PubMed ID: 15284100
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CGHcall: calling aberrations for array CGH tumor profiles.
    van de Wiel MA; Kim KI; Vosse SJ; van Wieringen WN; Wilting SM; Ylstra B
    Bioinformatics; 2007 Apr; 23(7):892-4. PubMed ID: 17267432
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Statistical tools for transgene copy number estimation based on real-time PCR.
    Yuan JS; Burris J; Stewart NR; Mentewab A; Stewart CN
    BMC Bioinformatics; 2007 Nov; 8 Suppl 7(Suppl 7):S6. PubMed ID: 18047729
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A multilevel model to address batch effects in copy number estimation using SNP arrays.
    Scharpf RB; Ruczinski I; Carvalho B; Doan B; Chakravarti A; Irizarry RA
    Biostatistics; 2011 Jan; 12(1):33-50. PubMed ID: 20625178
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Estimation and assessment of raw copy numbers at the single locus level.
    Bengtsson H; Irizarry R; Carvalho B; Speed TP
    Bioinformatics; 2008 Mar; 24(6):759-67. PubMed ID: 18204055
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Detection of recurrent rearrangement breakpoints from copy number data.
    Ritz A; Paris PL; Ittmann MM; Collins C; Raphael BJ
    BMC Bioinformatics; 2011 Apr; 12():114. PubMed ID: 21510904
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Detection of gene copy number changes in CGH microarrays using a spatially correlated mixture model.
    Broët P; Richardson S
    Bioinformatics; 2006 Apr; 22(8):911-8. PubMed ID: 16455750
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Analysis of array CGH data: from signal ratio to gain and loss of DNA regions.
    Hupé P; Stransky N; Thiery JP; Radvanyi F; Barillot E
    Bioinformatics; 2004 Dec; 20(18):3413-22. PubMed ID: 15381628
    [TBL] [Abstract][Full Text] [Related]  

  • 18. ITALICS: an algorithm for normalization and DNA copy number calling for Affymetrix SNP arrays.
    Rigaill G; Hupé P; Almeida A; La Rosa P; Meyniel JP; Decraene C; Barillot E
    Bioinformatics; 2008 Mar; 24(6):768-74. PubMed ID: 18252739
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Using expression arrays for copy number detection: an example from E. coli.
    Skvortsov D; Abdueva D; Stitzer ME; Finkel SE; Tavaré S
    BMC Bioinformatics; 2007 Jun; 8():203. PubMed ID: 17570850
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Advanced analysis and visualization of gene copy number and expression data.
    Autio R; Saarela M; Järvinen AK; Hautaniemi S; Astola J
    BMC Bioinformatics; 2009 Jan; 10 Suppl 1(Suppl 1):S70. PubMed ID: 19208175
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.