253 related articles for article (PubMed ID: 23703208)
1. ComiR: Combinatorial microRNA target prediction tool.
Coronnello C; Benos PV
Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W159-64. PubMed ID: 23703208
[TBL] [Abstract][Full Text] [Related]
2. An improvement of ComiR algorithm for microRNA target prediction by exploiting coding region sequences of mRNAs.
Bertolazzi G; Benos PV; Tumminello M; Coronnello C
BMC Bioinformatics; 2020 Sep; 21(Suppl 8):201. PubMed ID: 32938407
[TBL] [Abstract][Full Text] [Related]
3. DIANA-mirExTra v2.0: Uncovering microRNAs and transcription factors with crucial roles in NGS expression data.
Vlachos IS; Vergoulis T; Paraskevopoulou MD; Lykokanellos F; Georgakilas G; Georgiou P; Chatzopoulos S; Karagkouni D; Christodoulou F; Dalamagas T; Hatzigeorgiou AG
Nucleic Acids Res; 2016 Jul; 44(W1):W128-34. PubMed ID: 27207881
[TBL] [Abstract][Full Text] [Related]
4. Novel modeling of combinatorial miRNA targeting identifies SNP with potential role in bone density.
Coronnello C; Hartmaier R; Arora A; Huleihel L; Pandit KV; Bais AS; Butterworth M; Kaminski N; Stormo GD; Oesterreich S; Benos PV
PLoS Comput Biol; 2012; 8(12):e1002830. PubMed ID: 23284279
[TBL] [Abstract][Full Text] [Related]
5. DIANA-microT Web server upgrade supports Fly and Worm miRNA target prediction and bibliographic miRNA to disease association.
Maragkakis M; Vergoulis T; Alexiou P; Reczko M; Plomaritou K; Gousis M; Kourtis K; Koziris N; Dalamagas T; Hatzigeorgiou AG
Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W145-8. PubMed ID: 21551220
[TBL] [Abstract][Full Text] [Related]
6. Interactive exploration of RNA22 microRNA target predictions.
Loher P; Rigoutsos I
Bioinformatics; 2012 Dec; 28(24):3322-3. PubMed ID: 23074262
[TBL] [Abstract][Full Text] [Related]
7. DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows.
Paraskevopoulou MD; Georgakilas G; Kostoulas N; Vlachos IS; Vergoulis T; Reczko M; Filippidis C; Dalamagas T; Hatzigeorgiou AG
Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W169-73. PubMed ID: 23680784
[TBL] [Abstract][Full Text] [Related]
8. MicroTar: predicting microRNA targets from RNA duplexes.
Thadani R; Tammi MT
BMC Bioinformatics; 2006 Dec; 7 Suppl 5(Suppl 5):S20. PubMed ID: 17254305
[TBL] [Abstract][Full Text] [Related]
9. Analysis of microRNA-target interactions by a target structure based hybridization model.
Long D; Chan CY; Ding Y
Pac Symp Biocomput; 2008; ():64-74. PubMed ID: 18232104
[TBL] [Abstract][Full Text] [Related]
10. miRmap web: Comprehensive microRNA target prediction online.
Vejnar CE; Blum M; Zdobnov EM
Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W165-8. PubMed ID: 23716633
[TBL] [Abstract][Full Text] [Related]
11. STarMirDB: A database of microRNA binding sites.
Rennie W; Kanoria S; Liu C; Mallick B; Long D; Wolenc A; Carmack CS; Lu J; Ding Y
RNA Biol; 2016 Jun; 13(6):554-60. PubMed ID: 27144897
[TBL] [Abstract][Full Text] [Related]
12. mirConnX: condition-specific mRNA-microRNA network integrator.
Huang GT; Athanassiou C; Benos PV
Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W416-23. PubMed ID: 21558324
[TBL] [Abstract][Full Text] [Related]
13. A computational approach for identifying microRNA-target interactions using high-throughput CLIP and PAR-CLIP sequencing.
Chou CH; Lin FM; Chou MT; Hsu SD; Chang TH; Weng SL; Shrestha S; Hsiao CC; Hung JH; Huang HD
BMC Genomics; 2013; 14 Suppl 1(Suppl 1):S2. PubMed ID: 23368412
[TBL] [Abstract][Full Text] [Related]
14. PACCMIT/PACCMIT-CDS: identifying microRNA targets in 3' UTRs and coding sequences.
Šulc M; Marín RM; Robins HS; Vaníček J
Nucleic Acids Res; 2015 Jul; 43(W1):W474-9. PubMed ID: 25948580
[TBL] [Abstract][Full Text] [Related]
15. DIANA-microT web server: elucidating microRNA functions through target prediction.
Maragkakis M; Reczko M; Simossis VA; Alexiou P; Papadopoulos GL; Dalamagas T; Giannopoulos G; Goumas G; Koukis E; Kourtis K; Vergoulis T; Koziris N; Sellis T; Tsanakas P; Hatzigeorgiou AG
Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W273-6. PubMed ID: 19406924
[TBL] [Abstract][Full Text] [Related]
16. Prediction and verification of microRNA targets by MovingTargets, a highly adaptable prediction method.
Burgler C; Macdonald PM
BMC Genomics; 2005 Jun; 6():88. PubMed ID: 15943864
[TBL] [Abstract][Full Text] [Related]
17. MicroRNA binding sites in C. elegans 3' UTRs.
Liu C; Rennie WA; Mallick B; Kanoria S; Long D; Wolenc A; Carmack CS; Ding Y
RNA Biol; 2014; 11(6):693-701. PubMed ID: 24827614
[TBL] [Abstract][Full Text] [Related]
18. miRvestigator: web application to identify miRNAs responsible for co-regulated gene expression patterns discovered through transcriptome profiling.
Plaisier CL; Bare JC; Baliga NS
Nucleic Acids Res; 2011 Jul; 39(Web Server issue):W125-31. PubMed ID: 21602264
[TBL] [Abstract][Full Text] [Related]
19. miRGen 2.0: a database of microRNA genomic information and regulation.
Alexiou P; Vergoulis T; Gleditzsch M; Prekas G; Dalamagas T; Megraw M; Grosse I; Sellis T; Hatzigeorgiou AG
Nucleic Acids Res; 2010 Jan; 38(Database issue):D137-41. PubMed ID: 19850714
[TBL] [Abstract][Full Text] [Related]
20. Prediction of microRNA targets in Caenorhabditis elegans using a self-organizing map.
Heikkinen L; Kolehmainen M; Wong G
Bioinformatics; 2011 May; 27(9):1247-54. PubMed ID: 21422073
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]