185 related articles for article (PubMed ID: 23715978)
1. Approaches to modeling gene regulatory networks: a gentle introduction.
Schlitt T
Methods Mol Biol; 2013; 1021():13-35. PubMed ID: 23715978
[TBL] [Abstract][Full Text] [Related]
2. Transcriptional regulatory networks in Saccharomyces cerevisiae.
Lee TI; Rinaldi NJ; Robert F; Odom DT; Bar-Joseph Z; Gerber GK; Hannett NM; Harbison CT; Thompson CM; Simon I; Zeitlinger J; Jennings EG; Murray HL; Gordon DB; Ren B; Wyrick JJ; Tagne JB; Volkert TL; Fraenkel E; Gifford DK; Young RA
Science; 2002 Oct; 298(5594):799-804. PubMed ID: 12399584
[TBL] [Abstract][Full Text] [Related]
3. Computational discovery of gene modules and regulatory networks.
Bar-Joseph Z; Gerber GK; Lee TI; Rinaldi NJ; Yoo JY; Robert F; Gordon DB; Fraenkel E; Jaakkola TS; Young RA; Gifford DK
Nat Biotechnol; 2003 Nov; 21(11):1337-42. PubMed ID: 14555958
[TBL] [Abstract][Full Text] [Related]
4. Refining current knowledge on the yeast FLR1 regulatory network by combined experimental and computational approaches.
Teixeira MC; Dias PJ; Monteiro PT; Sala A; Oliveira AL; Freitas AT; Sá-Correia I
Mol Biosyst; 2010 Dec; 6(12):2471-81. PubMed ID: 20938527
[TBL] [Abstract][Full Text] [Related]
5. Reconstructing genetic networks in yeast.
Zhang Z; Gerstein M
Nat Biotechnol; 2003 Nov; 21(11):1295-7. PubMed ID: 14595359
[No Abstract] [Full Text] [Related]
6. Transcriptional networks: reverse-engineering gene regulation on a global scale.
Chua G; Robinson MD; Morris Q; Hughes TR
Curr Opin Microbiol; 2004 Dec; 7(6):638-46. PubMed ID: 15556037
[TBL] [Abstract][Full Text] [Related]
7. Expression dynamics of a cellular metabolic network.
Kharchenko P; Church GM; Vitkup D
Mol Syst Biol; 2005; 1():2005.0016. PubMed ID: 16729051
[TBL] [Abstract][Full Text] [Related]
8. Inference of active transcriptional networks by integration of gene expression kinetics modeling and multisource data.
Vu TT; Vohradsky J
Genomics; 2009 May; 93(5):426-33. PubMed ID: 19442636
[TBL] [Abstract][Full Text] [Related]
9. Noise can induce bimodality in positive transcriptional feedback loops without bistability.
To TL; Maheshri N
Science; 2010 Feb; 327(5969):1142-5. PubMed ID: 20185727
[TBL] [Abstract][Full Text] [Related]
10. The YEASTRACT database: a tool for the analysis of transcription regulatory associations in Saccharomyces cerevisiae.
Teixeira MC; Monteiro P; Jain P; Tenreiro S; Fernandes AR; Mira NP; Alenquer M; Freitas AT; Oliveira AL; Sá-Correia I
Nucleic Acids Res; 2006 Jan; 34(Database issue):D446-51. PubMed ID: 16381908
[TBL] [Abstract][Full Text] [Related]
11. Interaction networks: lessons from large-scale studies in yeast.
Cagney G
Proteomics; 2009 Oct; 9(20):4799-811. PubMed ID: 19743423
[TBL] [Abstract][Full Text] [Related]
12. Faithful modeling of transient expression and its application to elucidating negative feedback regulation.
Rubinstein A; Gurevich V; Kasulin-Boneh Z; Pnueli L; Kassir Y; Pinter RY
Proc Natl Acad Sci U S A; 2007 Apr; 104(15):6241-6. PubMed ID: 17400752
[TBL] [Abstract][Full Text] [Related]
13. Gene expression: dialing up the frequency.
Maheshri N
Curr Biol; 2008 Dec; 18(24):R1136-9. PubMed ID: 19108770
[TBL] [Abstract][Full Text] [Related]
14. Genetic reconstruction of a functional transcriptional regulatory network.
Hu Z; Killion PJ; Iyer VR
Nat Genet; 2007 May; 39(5):683-7. PubMed ID: 17417638
[TBL] [Abstract][Full Text] [Related]
15. Inferring gene correlation networks from transcription factor binding sites.
Mahdevar G; Nowzari-Dalini A; Sadeghi M
Genes Genet Syst; 2013; 88(5):301-9. PubMed ID: 24694393
[TBL] [Abstract][Full Text] [Related]
16. Qualitative modelling and formal verification of the FLR1 gene mancozeb response in Saccharomyces cerevisiae.
Monteiro PT; Dias PJ; Ropers D; Oliveira AL; Sá-Correia I; Teixeira MC; Freitas AT
IET Syst Biol; 2011 Sep; 5(5):308-16. PubMed ID: 22010757
[TBL] [Abstract][Full Text] [Related]
17. Characterization of complex regulatory networks and identification of promoter regulatory elements in yeast: "in silico" and "wet-lab" approaches.
Mira NP; Teixeira MC; Sá-Correia I
Methods Mol Biol; 2012; 809():27-48. PubMed ID: 22113266
[TBL] [Abstract][Full Text] [Related]
18. Specificity and stability in topology of protein networks.
Maslov S; Sneppen K
Science; 2002 May; 296(5569):910-3. PubMed ID: 11988575
[TBL] [Abstract][Full Text] [Related]
19. Dissection of the promoter of the HAP4 gene in S. cerevisiae unveils a complex regulatory framework of transcriptional regulation.
Brons JF; De Jong M; Valens M; Grivell LA; Bolotin-Fukuhara M; Blom J
Yeast; 2002 Aug; 19(11):923-32. PubMed ID: 12125049
[TBL] [Abstract][Full Text] [Related]
20. Statistical methods to infer cooperative binding among transcription factors in Saccharomyces cerevisiae.
Datta D; Zhao H
Bioinformatics; 2008 Feb; 24(4):545-52. PubMed ID: 17989095
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
