154 related articles for article (PubMed ID: 23719732)
1. Stochastic analysis of reaction-diffusion processes.
Hu J; Kang HW; Othmer HG
Bull Math Biol; 2014 Apr; 76(4):854-94. PubMed ID: 23719732
[TBL] [Abstract][Full Text] [Related]
2. Constant-complexity stochastic simulation algorithm with optimal binning.
Sanft KR; Othmer HG
J Chem Phys; 2015 Aug; 143(7):074108. PubMed ID: 26298116
[TBL] [Abstract][Full Text] [Related]
3. Lattice Microbes: high-performance stochastic simulation method for the reaction-diffusion master equation.
Roberts E; Stone JE; Luthey-Schulten Z
J Comput Chem; 2013 Jan; 34(3):245-55. PubMed ID: 23007888
[TBL] [Abstract][Full Text] [Related]
4. Hybrid stochastic simulations of intracellular reaction-diffusion systems.
Kalantzis G
Comput Biol Chem; 2009 Jun; 33(3):205-15. PubMed ID: 19414282
[TBL] [Abstract][Full Text] [Related]
5. Simulating the cellular passive transport of glucose using a time-dependent extension of Gillespie algorithm for stochastic pi-calculus.
Lecca P
Int J Data Min Bioinform; 2007; 1(4):315-36. PubMed ID: 18402045
[TBL] [Abstract][Full Text] [Related]
6. Exact on-lattice stochastic reaction-diffusion simulations using partial-propensity methods.
Ramaswamy R; Sbalzarini IF
J Chem Phys; 2011 Dec; 135(24):244103. PubMed ID: 22225140
[TBL] [Abstract][Full Text] [Related]
7. Multiscale Stochastic Reaction-Diffusion Algorithms Combining Markov Chain Models with Stochastic Partial Differential Equations.
Kang HW; Erban R
Bull Math Biol; 2019 Aug; 81(8):3185-3213. PubMed ID: 31165406
[TBL] [Abstract][Full Text] [Related]
8. The diffusive finite state projection algorithm for efficient simulation of the stochastic reaction-diffusion master equation.
Drawert B; Lawson MJ; Petzold L; Khammash M
J Chem Phys; 2010 Feb; 132(7):074101. PubMed ID: 20170209
[TBL] [Abstract][Full Text] [Related]
9. A multi-time-scale analysis of chemical reaction networks: II. Stochastic systems.
Kan X; Lee CH; Othmer HG
J Math Biol; 2016 Nov; 73(5):1081-1129. PubMed ID: 26945582
[TBL] [Abstract][Full Text] [Related]
10. URDME: a modular framework for stochastic simulation of reaction-transport processes in complex geometries.
Drawert B; Engblom S; Hellander A
BMC Syst Biol; 2012 Jun; 6():76. PubMed ID: 22727185
[TBL] [Abstract][Full Text] [Related]
11. Hybrid deterministic/stochastic simulation of complex biochemical systems.
Lecca P; Bagagiolo F; Scarpa M
Mol Biosyst; 2017 Nov; 13(12):2672-2686. PubMed ID: 29058744
[TBL] [Abstract][Full Text] [Related]
12. Stochastic operator-splitting method for reaction-diffusion systems.
Choi T; Maurya MR; Tartakovsky DM; Subramaniam S
J Chem Phys; 2012 Nov; 137(18):184102. PubMed ID: 23163359
[TBL] [Abstract][Full Text] [Related]
13. Multiresolution stochastic simulations of reaction-diffusion processes.
Bayati B; Chatelain P; Koumoutsakos P
Phys Chem Chem Phys; 2008 Oct; 10(39):5963-6. PubMed ID: 18825283
[TBL] [Abstract][Full Text] [Related]
14. Stochastic Simulation of Pattern Formation in Growing Tissue: A Multilevel Approach.
Engblom S
Bull Math Biol; 2019 Aug; 81(8):3010-3023. PubMed ID: 29926381
[TBL] [Abstract][Full Text] [Related]
15. A new method for choosing the computational cell in stochastic reaction-diffusion systems.
Kang HW; Zheng L; Othmer HG
J Math Biol; 2012 Dec; 65(6-7):1017-99. PubMed ID: 22071651
[TBL] [Abstract][Full Text] [Related]
16. Fractional diffusion-reaction stochastic simulations.
Bayati BS
J Chem Phys; 2013 Mar; 138(10):104117. PubMed ID: 23514475
[TBL] [Abstract][Full Text] [Related]
17. Stochastic simulation of reaction-diffusion systems: A fluctuating-hydrodynamics approach.
Kim C; Nonaka A; Bell JB; Garcia AL; Donev A
J Chem Phys; 2017 Mar; 146(12):124110. PubMed ID: 28388111
[TBL] [Abstract][Full Text] [Related]
18. A hybrid method for micro-mesoscopic stochastic simulation of reaction-diffusion systems.
Sayyidmousavi A; Rohlf K; Ilie S
Math Biosci; 2019 Jun; 312():23-32. PubMed ID: 30998936
[TBL] [Abstract][Full Text] [Related]
19. MesoRD 1.0: Stochastic reaction-diffusion simulations in the microscopic limit.
Fange D; Mahmutovic A; Elf J
Bioinformatics; 2012 Dec; 28(23):3155-7. PubMed ID: 23044538
[TBL] [Abstract][Full Text] [Related]
20. Waves in a Stochastic Cell Motility Model.
Hamster C; van Heijster P
Bull Math Biol; 2023 Jun; 85(8):70. PubMed ID: 37329390
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
