456 related articles for article (PubMed ID: 23734239)
1. Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections.
Salipante SJ; Sengupta DJ; Rosenthal C; Costa G; Spangler J; Sims EH; Jacobs MA; Miller SI; Hoogestraat DR; Cookson BT; McCoy C; Matsen FA; Shendure J; Lee CC; Harkins TT; Hoffman NG
PLoS One; 2013; 8(5):e65226. PubMed ID: 23734239
[TBL] [Abstract][Full Text] [Related]
2. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
Hahn A; Sanyal A; Perez GF; Colberg-Poley AM; Campos J; Rose MC; Pérez-Losada M
J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
[TBL] [Abstract][Full Text] [Related]
3. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
[TBL] [Abstract][Full Text] [Related]
4. Fungal and Bacterial Diversity of Airway Microbiota in Adults with Cystic Fibrosis: Concordance Between Conventional Methods and Ultra-Deep Sequencing, and Their Practical use in the Clinical Laboratory.
Botterel F; Angebault C; Cabaret O; Stressmann FA; Costa JM; Wallet F; Wallaert B; Bruce K; Delhaes L
Mycopathologia; 2018 Feb; 183(1):171-183. PubMed ID: 28766039
[TBL] [Abstract][Full Text] [Related]
5. Analysis of the cystic fibrosis lung microbiota via serial Illumina sequencing of bacterial 16S rRNA hypervariable regions.
Maughan H; Wang PW; Diaz Caballero J; Fung P; Gong Y; Donaldson SL; Yuan L; Keshavjee S; Zhang Y; Yau YC; Waters VJ; Tullis DE; Hwang DM; Guttman DS
PLoS One; 2012; 7(10):e45791. PubMed ID: 23056217
[TBL] [Abstract][Full Text] [Related]
6. Reliability of quantitative real-time PCR for bacterial detection in cystic fibrosis airway specimens.
Zemanick ET; Wagner BD; Sagel SD; Stevens MJ; Accurso FJ; Harris JK
PLoS One; 2010 Nov; 5(11):e15101. PubMed ID: 21152087
[TBL] [Abstract][Full Text] [Related]
7. Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes.
Earl JP; Adappa ND; Krol J; Bhat AS; Balashov S; Ehrlich RL; Palmer JN; Workman AD; Blasetti M; Sen B; Hammond J; Cohen NA; Ehrlich GD; Mell JC
Microbiome; 2018 Oct; 6(1):190. PubMed ID: 30352611
[TBL] [Abstract][Full Text] [Related]
8. Culture enriched molecular profiling of the cystic fibrosis airway microbiome.
Sibley CD; Grinwis ME; Field TR; Eshaghurshan CS; Faria MM; Dowd SE; Parkins MD; Rabin HR; Surette MG
PLoS One; 2011; 6(7):e22702. PubMed ID: 21829484
[TBL] [Abstract][Full Text] [Related]
9. Detection of bacterial pathogens from clinical specimens using conventional microbial culture and 16S metagenomics: a comparative study.
Abayasekara LM; Perera J; Chandrasekharan V; Gnanam VS; Udunuwara NA; Liyanage DS; Bulathsinhala NE; Adikary S; Aluthmuhandiram JVS; Thanaseelan CS; Tharmakulasingam DP; Karunakaran T; Ilango J
BMC Infect Dis; 2017 Sep; 17(1):631. PubMed ID: 28927397
[TBL] [Abstract][Full Text] [Related]
10. Microbial diversity in the sputum of a cystic fibrosis patient studied with 16S rDNA pyrosequencing.
Armougom F; Bittar F; Stremler N; Rolain JM; Robert C; Dubus JC; Sarles J; Raoult D; La Scola B
Eur J Clin Microbiol Infect Dis; 2009 Sep; 28(9):1151-4. PubMed ID: 19449045
[TBL] [Abstract][Full Text] [Related]
11. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
[TBL] [Abstract][Full Text] [Related]
12. Targeting the 16S rRNA Gene by Reverse Complement PCR Next-Generation Sequencing: Specific and Sensitive Detection and Identification of Microbes Directly in Clinical Samples.
Moorlag SJCFM; Coolen JPM; van den Bosch B; Jin EH; Buil JB; Wertheim HFL; Melchers WJG
Microbiol Spectr; 2023 Jun; 11(3):e0448322. PubMed ID: 37227289
[TBL] [Abstract][Full Text] [Related]
13. Sputum DNA sequencing in cystic fibrosis: non-invasive access to the lung microbiome and to pathogen details.
Feigelman R; Kahlert CR; Baty F; Rassouli F; Kleiner RL; Kohler P; Brutsche MH; von Mering C
Microbiome; 2017 Feb; 5(1):20. PubMed ID: 28187782
[TBL] [Abstract][Full Text] [Related]
14. Molecular typing of the bacterial flora in sputum of cystic fibrosis patients.
Kolak M; Karpati F; Monstein HJ; Jonasson J
Int J Med Microbiol; 2003 Aug; 293(4):309-17. PubMed ID: 14503795
[TBL] [Abstract][Full Text] [Related]
15. Comparison of conventional and molecular methods for the detection of bacterial pathogens in sputum samples from cystic fibrosis patients.
van Belkum A; Renders NH; Smith S; Overbeek SE; Verbrugh HA
FEMS Immunol Med Microbiol; 2000 Jan; 27(1):51-7. PubMed ID: 10617790
[TBL] [Abstract][Full Text] [Related]
16. Validation and Retrospective Clinical Evaluation of a Quantitative 16S rRNA Gene Metagenomic Sequencing Assay for Bacterial Pathogen Detection in Body Fluids.
Culbreath K; Melanson S; Gale J; Baker J; Li F; Saebo O; Kommedal O; Contreras D; Garner OB; Yang S
J Mol Diagn; 2019 Sep; 21(5):913-923. PubMed ID: 31229651
[TBL] [Abstract][Full Text] [Related]
17. Development and evaluation of a culture-free microbiota profiling platform (MYcrobiota) for clinical diagnostics.
Boers SA; Hiltemann SD; Stubbs AP; Jansen R; Hays JP
Eur J Clin Microbiol Infect Dis; 2018 Jun; 37(6):1081-1089. PubMed ID: 29549470
[TBL] [Abstract][Full Text] [Related]
18. Purifying the impure: sequencing metagenomes and metatranscriptomes from complex animal-associated samples.
Lim YW; Haynes M; Furlan M; Robertson CE; Harris JK; Rohwer F
J Vis Exp; 2014 Dec; (94):. PubMed ID: 25549184
[TBL] [Abstract][Full Text] [Related]
19. Development and Validation of a Reference Data Set for Assigning
Kosecka-Strojek M; Sabat AJ; Akkerboom V; Becker K; van Zanten E; Wisselink G; Miedzobrodzki J; Kooistra-Smid AMDM; Friedrich AW
Front Cell Infect Microbiol; 2019; 9():278. PubMed ID: 31456949
[TBL] [Abstract][Full Text] [Related]
20. [16S rRNA gene sequencing for pathogen identification from clinical specimens].
Lu XX; Wu W; Wang M; Huang YF
Zhonghua Yi Xue Za Zhi; 2008 Jan; 88(2):123-6. PubMed ID: 18353221
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
