These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

310 related articles for article (PubMed ID: 23741402)

  • 1. Passing messages between biological networks to refine predicted interactions.
    Glass K; Huttenhower C; Quackenbush J; Yuan GC
    PLoS One; 2013; 8(5):e64832. PubMed ID: 23741402
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Sample scale-free gene regulatory network using gene ontology.
    Chen G; Larsen P; Almasri E; Dai Y
    Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():5523-6. PubMed ID: 17946312
    [TBL] [Abstract][Full Text] [Related]  

  • 3. An overview of bioinformatics methods for modeling biological pathways in yeast.
    Hou J; Acharya L; Zhu D; Cheng J
    Brief Funct Genomics; 2016 Mar; 15(2):95-108. PubMed ID: 26476430
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data.
    Panchy NL; Lloyd JP; Shiu SH
    BMC Genomics; 2020 Feb; 21(1):159. PubMed ID: 32054475
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Integrating transcriptional and protein interaction networks to prioritize condition-specific master regulators.
    Padi M; Quackenbush J
    BMC Syst Biol; 2015 Nov; 9():80. PubMed ID: 26576632
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Biological Network Inference and analysis using SEBINI and CABIN.
    Taylor R; Singhal M
    Methods Mol Biol; 2009; 541():551-76. PubMed ID: 19381531
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Computational reconstruction of protein-protein interaction networks: algorithms and issues.
    Franzosa E; Linghu B; Xia Y
    Methods Mol Biol; 2009; 541():89-100. PubMed ID: 19381528
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Computational Analysis of the Chaperone Interaction Networks.
    Kumar A; Rizzolo K; Zilles S; Babu M; Houry WA
    Methods Mol Biol; 2018; 1709():275-291. PubMed ID: 29177666
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Gene expression network reconstruction by convex feature selection when incorporating genetic perturbations.
    Logsdon BA; Mezey J
    PLoS Comput Biol; 2010 Dec; 6(12):e1001014. PubMed ID: 21152011
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Distance-wise pathway discovery from protein-protein interaction networks weighted by semantic similarity.
    Jaromerska S; Praus P; Cho YR
    J Bioinform Comput Biol; 2014 Feb; 12(1):1450004. PubMed ID: 24467762
    [TBL] [Abstract][Full Text] [Related]  

  • 11. GPRuler: Metabolic gene-protein-reaction rules automatic reconstruction.
    Di Filippo M; Damiani C; Pescini D
    PLoS Comput Biol; 2021 Nov; 17(11):e1009550. PubMed ID: 34748537
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Assessment of crosstalks between the Snf1 kinase complex and sphingolipid metabolism in S. cerevisiae via systems biology approaches.
    Borklu Yucel E; Ulgen KO
    Mol Biosyst; 2013 Nov; 9(11):2914-31. PubMed ID: 24056632
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Multiobjective optimization to reconstruct biological networks.
    Naef A; Abdullah R; Abdul Rashid N
    Biosystems; 2018 Dec; 174():22-36. PubMed ID: 30236951
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Modular biological function is most effectively captured by combining molecular interaction data types.
    Ames RM; Macpherson JI; Pinney JW; Lovell SC; Robertson DL
    PLoS One; 2013; 8(5):e62670. PubMed ID: 23658761
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparative analysis of module-based versus direct methods for reverse-engineering transcriptional regulatory networks.
    Michoel T; De Smet R; Joshi A; Van de Peer Y; Marchal K
    BMC Syst Biol; 2009 May; 3():49. PubMed ID: 19422680
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Linking the signaling cascades and dynamic regulatory networks controlling stress responses.
    Gitter A; Carmi M; Barkai N; Bar-Joseph Z
    Genome Res; 2013 Feb; 23(2):365-76. PubMed ID: 23064748
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Boolean factor graph model for biological systems: the yeast cell-cycle network.
    Kotiang S; Eslami A
    BMC Bioinformatics; 2021 Sep; 22(1):442. PubMed ID: 34535069
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Bi-functional biochemical networks.
    Zhang M; Tang C
    Phys Biol; 2018 Oct; 16(1):016001. PubMed ID: 30375366
    [TBL] [Abstract][Full Text] [Related]  

  • 19. TIGER: Toolbox for integrating genome-scale metabolic models, expression data, and transcriptional regulatory networks.
    Jensen PA; Lutz KA; Papin JA
    BMC Syst Biol; 2011 Sep; 5():147. PubMed ID: 21943338
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A predictive model of the oxygen and heme regulatory network in yeast.
    Kundaje A; Xin X; Lan C; Lianoglou S; Zhou M; Zhang L; Leslie C
    PLoS Comput Biol; 2008 Nov; 4(11):e1000224. PubMed ID: 19008939
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.