103 related articles for article (PubMed ID: 23764338)
1. An artifact caused by undersampling optimal trees in supermatrix analyses of locally sampled characters.
Simmons MP; Goloboff PA
Mol Phylogenet Evol; 2013 Oct; 69(1):265-75. PubMed ID: 23764338
[TBL] [Abstract][Full Text] [Related]
2. Quantification and relative severity of inflated branch-support values generated by alternative methods: an empirical example.
Simmons MP; Norton AP
Mol Phylogenet Evol; 2013 Apr; 67(1):277-96. PubMed ID: 23403225
[TBL] [Abstract][Full Text] [Related]
3. Spurious 99% bootstrap and jackknife support for unsupported clades.
Simmons MP; Freudenstein JV
Mol Phylogenet Evol; 2011 Oct; 61(1):177-91. PubMed ID: 21703355
[TBL] [Abstract][Full Text] [Related]
4. Limitations of locally sampled characters in phylogenetic analyses of sparse supermatrices.
Simmons MP
Mol Phylogenet Evol; 2014 May; 74():1-14. PubMed ID: 24530637
[TBL] [Abstract][Full Text] [Related]
5. Radical instability and spurious branch support by likelihood when applied to matrices with non-random distributions of missing data.
Simmons MP
Mol Phylogenet Evol; 2012 Jan; 62(1):472-84. PubMed ID: 22067131
[TBL] [Abstract][Full Text] [Related]
6. Bias in tree searches and its consequences for measuring group supports.
Goloboff PA; Simmons MP
Syst Biol; 2014 Nov; 63(6):851-61. PubMed ID: 25074580
[TBL] [Abstract][Full Text] [Related]
7. Dubious resolution and support from published sparse supermatrices: the importance of thorough tree searches.
Simmons MP; Goloboff PA
Mol Phylogenet Evol; 2014 Sep; 78():334-48. PubMed ID: 24929246
[TBL] [Abstract][Full Text] [Related]
8. A confounding effect of missing data on character conflict in maximum likelihood and Bayesian MCMC phylogenetic analyses.
Simmons MP
Mol Phylogenet Evol; 2014 Nov; 80():267-80. PubMed ID: 25173567
[TBL] [Abstract][Full Text] [Related]
9. Increasing the efficiency of searches for the maximum likelihood tree in a phylogenetic analysis of up to 150 nucleotide sequences.
Morrison DA
Syst Biol; 2007 Dec; 56(6):988-1010. PubMed ID: 18066931
[TBL] [Abstract][Full Text] [Related]
10. Phylogenetics of Anthyllis (Leguminosae: Papilionoideae: Loteae): Partial incongruence between nuclear and plastid markers, a long branch problem and implications for morphological evolution.
Degtjareva GV; Valiejo-Roman CM; Samigullin TH; Guara-Requena M; Sokoloff DD
Mol Phylogenet Evol; 2012 Feb; 62(2):693-707. PubMed ID: 22142737
[TBL] [Abstract][Full Text] [Related]
11. Snowdrops falling slowly into place: an improved phylogeny for Galanthus (Amaryllidaceae).
Rønsted N; Zubov D; Bruun-Lund S; Davis AP
Mol Phylogenet Evol; 2013 Oct; 69(1):205-17. PubMed ID: 23747523
[TBL] [Abstract][Full Text] [Related]
12. Phylogenetic supermatrix analysis of GenBank sequences from 2228 papilionoid legumes.
McMahon MM; Sanderson MJ
Syst Biol; 2006 Oct; 55(5):818-36. PubMed ID: 17060202
[TBL] [Abstract][Full Text] [Related]
13. Complete generic-level phylogenetic analyses of palms (Arecaceae) with comparisons of supertree and supermatrix approaches.
Baker WJ; Savolainen V; Asmussen-Lange CB; Chase MW; Dransfield J; Forest F; Harley MM; Uhl NW; Wilkinson M
Syst Biol; 2009 Apr; 58(2):240-56. PubMed ID: 20525581
[TBL] [Abstract][Full Text] [Related]
14. Phylogeny of Bembidion and related ground beetles (Coleoptera: Carabidae: Trechinae: Bembidiini: Bembidiina).
Maddison DR
Mol Phylogenet Evol; 2012 Jun; 63(3):533-76. PubMed ID: 22421212
[TBL] [Abstract][Full Text] [Related]
15. Collapsing dubiously resolved gene-tree branches in phylogenomic coalescent analyses.
Simmons MP; Gatesy J
Mol Phylogenet Evol; 2021 May; 158():107092. PubMed ID: 33545272
[TBL] [Abstract][Full Text] [Related]
16. Disparate parametric branch-support values from ambiguous characters.
Simmons MP; Randle CP
Mol Phylogenet Evol; 2014 Sep; 78():66-86. PubMed ID: 24821621
[TBL] [Abstract][Full Text] [Related]
17. The prevalence of multifurcations in tree-space and their implications for tree-search.
Whelan S; Money D
Mol Biol Evol; 2010 Dec; 27(12):2674-7. PubMed ID: 20584772
[TBL] [Abstract][Full Text] [Related]
18. Is homoplasy or lineage sorting the source of incongruent mtdna and nuclear gene trees in the stiff-tailed ducks (Nomonyx-Oxyura)?
McCracken K; Sorenson M
Syst Biol; 2005 Feb; 54(1):35-55. PubMed ID: 15805009
[TBL] [Abstract][Full Text] [Related]
19. The devil in the details: interactions between the branch-length prior and likelihood model affect node support and branch lengths in the phylogeny of the Psoraceae.
Ekman S; Blaalid R
Syst Biol; 2011 Jul; 60(4):541-61. PubMed ID: 21436107
[TBL] [Abstract][Full Text] [Related]
20. Measuring branch support in species trees obtained by gene tree parsimony.
Joly S; Bruneau A
Syst Biol; 2009 Feb; 58(1):100-13. PubMed ID: 20525571
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]