475 related articles for article (PubMed ID: 23818646)
1. Massively parallel in vivo enhancer assay reveals that highly local features determine the cis-regulatory function of ChIP-seq peaks.
White MA; Myers CA; Corbo JC; Cohen BA
Proc Natl Acad Sci U S A; 2013 Jul; 110(29):11952-7. PubMed ID: 23818646
[TBL] [Abstract][Full Text] [Related]
2. CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.
Corbo JC; Lawrence KA; Karlstetter M; Myers CA; Abdelaziz M; Dirkes W; Weigelt K; Seifert M; Benes V; Fritsche LG; Weber BH; Langmann T
Genome Res; 2010 Nov; 20(11):1512-25. PubMed ID: 20693478
[TBL] [Abstract][Full Text] [Related]
3. Information content differentiates enhancers from silencers in mouse photoreceptors.
Friedman RZ; Granas DM; Myers CA; Corbo JC; Cohen BA; White MA
Elife; 2021 Sep; 10():. PubMed ID: 34486522
[TBL] [Abstract][Full Text] [Related]
4. Otx2 ChIP-seq reveals unique and redundant functions in the mature mouse retina.
Samuel A; Housset M; Fant B; Lamonerie T
PLoS One; 2014; 9(2):e89110. PubMed ID: 24558479
[TBL] [Abstract][Full Text] [Related]
5. A massively parallel reporter assay reveals context-dependent activity of homeodomain binding sites in vivo.
Hughes AEO; Myers CA; Corbo JC
Genome Res; 2018 Oct; 28(10):1520-1531. PubMed ID: 30158147
[TBL] [Abstract][Full Text] [Related]
6. CRX directs photoreceptor differentiation by accelerating chromatin remodeling at specific target sites.
Ruzycki PA; Zhang X; Chen S
Epigenetics Chromatin; 2018 Aug; 11(1):42. PubMed ID: 30068366
[TBL] [Abstract][Full Text] [Related]
7. Retinal expression of the X-linked juvenile retinoschisis (RS1) gene is controlled by an upstream CpG island and two opposing CRX-bound regions.
Kraus D; Karlstetter M; Walczak Y; Hilfinger D; Langmann T; Weber BH
Biochim Biophys Acta; 2011; 1809(4-6):245-54. PubMed ID: 21392589
[TBL] [Abstract][Full Text] [Related]
8. The photoreceptor-specific nuclear receptor Nr2e3 interacts with Crx and exerts opposing effects on the transcription of rod versus cone genes.
Peng GH; Ahmad O; Ahmad F; Liu J; Chen S
Hum Mol Genet; 2005 Mar; 14(6):747-64. PubMed ID: 15689355
[TBL] [Abstract][Full Text] [Related]
9. Transcriptional regulation of rod photoreceptor homeostasis revealed by in vivo NRL targetome analysis.
Hao H; Kim DS; Klocke B; Johnson KR; Cui K; Gotoh N; Zang C; Gregorski J; Gieser L; Peng W; Fann Y; Seifert M; Zhao K; Swaroop A
PLoS Genet; 2012; 8(4):e1002649. PubMed ID: 22511886
[TBL] [Abstract][Full Text] [Related]
10. In silico modeling of epigenetic-induced changes in photoreceptor cis-regulatory elements.
Hossain RA; Dunham NR; Enke RA; Berndsen CE
Mol Vis; 2018; 24():218-230. PubMed ID: 29563767
[TBL] [Abstract][Full Text] [Related]
11. Pathogenic variants in
Shepherdson JL; Friedman RZ; Zheng Y; Sun C; Oh IY; Granas DM; Cohen BA; Chen S; White MA
Genome Res; 2024 Mar; 34(2):243-255. PubMed ID: 38355306
[TBL] [Abstract][Full Text] [Related]
12. Cone-rod homeobox CRX controls presynaptic active zone formation in photoreceptors of mammalian retina.
Assawachananont J; Kim SY; Kaya KD; Fariss R; Roger JE; Swaroop A
Hum Mol Genet; 2018 Oct; 27(20):3555-3567. PubMed ID: 30084954
[TBL] [Abstract][Full Text] [Related]
13. Sterile alpha motif containing 7 (samd7) is a novel crx-regulated transcriptional repressor in the retina.
Hlawatsch J; Karlstetter M; Aslanidis A; Lückoff A; Walczak Y; Plank M; Böck J; Langmann T
PLoS One; 2013; 8(4):e60633. PubMed ID: 23565263
[TBL] [Abstract][Full Text] [Related]
14. Cloning and characterization of the canine photoreceptor specific cone-rod homeobox (CRX) gene and evaluation as a candidate for early onset photoreceptor diseases in the dog.
Akhmedov NB; Baldwin VJ; Zangerl B; Kijas JW; Hunter L; Minoofar KD; Mellersh C; Ostrander EA; Acland GM; Farber DB; Aguirre GD
Mol Vis; 2002 Mar; 8():79-84. PubMed ID: 11951083
[TBL] [Abstract][Full Text] [Related]
15. Active opsin loci adopt intrachromosomal loops that depend on the photoreceptor transcription factor network.
Peng GH; Chen S
Proc Natl Acad Sci U S A; 2011 Oct; 108(43):17821-6. PubMed ID: 22006320
[TBL] [Abstract][Full Text] [Related]
16. Crx activates opsin transcription by recruiting HAT-containing co-activators and promoting histone acetylation.
Peng GH; Chen S
Hum Mol Genet; 2007 Oct; 16(20):2433-52. PubMed ID: 17656371
[TBL] [Abstract][Full Text] [Related]
17. RETINA-specific expression of Kcnv2 is controlled by cone-rod homeobox (Crx) and neural retina leucine zipper (Nrl).
Aslanidis A; Karlstetter M; Walczak Y; Jägle H; Langmann T
Adv Exp Med Biol; 2014; 801():31-41. PubMed ID: 24664678
[TBL] [Abstract][Full Text] [Related]
18. A biophysical model for analysis of transcription factor interaction and binding site arrangement from genome-wide binding data.
He X; Chen CC; Hong F; Fang F; Sinha S; Ng HH; Zhong S
PLoS One; 2009 Dec; 4(12):e8155. PubMed ID: 19956545
[TBL] [Abstract][Full Text] [Related]
19. Barrier to autointegration factor interacts with the cone-rod homeobox and represses its transactivation function.
Wang X; Xu S; Rivolta C; Li LY; Peng GH; Swain PK; Sung CH; Swaroop A; Berson EL; Dryja TP; Chen S
J Biol Chem; 2002 Nov; 277(45):43288-300. PubMed ID: 12215455
[TBL] [Abstract][Full Text] [Related]
20. Direct ChIP-Seq significance analysis improves target prediction.
Bansal M; Mendiratta G; Anand S; Kushwaha R; Kim R; Kustagi M; Iyer A; Chaganti RS; Califano A; Sumazin P
BMC Genomics; 2015; 16 Suppl 5(Suppl 5):S4. PubMed ID: 26040656
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]