BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

762 related articles for article (PubMed ID: 23822231)

  • 1. Coarse-grained Monte Carlo simulations of non-equilibrium systems.
    Liu X; Crocker JC; Sinno T
    J Chem Phys; 2013 Jun; 138(24):244111. PubMed ID: 23822231
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A general method for spatially coarse-graining Metropolis Monte Carlo simulations onto a lattice.
    Liu X; Seider WD; Sinno T
    J Chem Phys; 2013 Mar; 138(11):114104. PubMed ID: 23534624
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Coarse-grained lattice Monte Carlo simulations with continuous interaction potentials.
    Liu X; Seider WD; Sinno T
    Phys Rev E Stat Nonlin Soft Matter Phys; 2012 Aug; 86(2 Pt 2):026708. PubMed ID: 23005883
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Spatially adaptive lattice coarse-grained Monte Carlo simulations for diffusion of interacting molecules.
    Chatterjee A; Vlachos DG; Katsoulakis MA
    J Chem Phys; 2004 Dec; 121(22):11420-31. PubMed ID: 15634102
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Enhanced Sampling of an Atomic Model with Hybrid Nonequilibrium Molecular Dynamics-Monte Carlo Simulations Guided by a Coarse-Grained Model.
    Chen Y; Roux B
    J Chem Theory Comput; 2015 Aug; 11(8):3572-83. PubMed ID: 26574442
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Coarse-grained protein model with residue orientation energies derived from atomic force fields.
    Betancourt MR
    J Phys Chem B; 2009 Nov; 113(44):14824-30. PubMed ID: 19817469
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Coarse-grained lattice kinetic Monte Carlo simulation of systems of strongly interacting particles.
    Dai J; Seider WD; Sinno T
    J Chem Phys; 2008 May; 128(19):194705. PubMed ID: 18500884
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Transition network based on equilibrium sampling: a new method for extracting kinetic information from Monte Carlo simulations of protein folding.
    Klenin KV; Wenzel W
    J Chem Phys; 2011 Dec; 135(23):235105. PubMed ID: 22191905
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Modeling real dynamics in the coarse-grained representation of condensed phase systems.
    Izvekov S; Voth GA
    J Chem Phys; 2006 Oct; 125(15):151101. PubMed ID: 17059230
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The multiscale coarse-graining method. III. A test of pairwise additivity of the coarse-grained potential and of new basis functions for the variational calculation.
    Das A; Andersen HC
    J Chem Phys; 2009 Jul; 131(3):034102. PubMed ID: 19624176
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Consistent coarse-graining strategy for polymer solutions in the thermal crossover from good to θ solvent.
    D'Adamo G; Pelissetto A; Pierleoni C
    J Chem Phys; 2013 Jul; 139(3):034901. PubMed ID: 23883051
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Topological coarse graining of polymer chains using wavelet-accelerated Monte Carlo. II. Self-avoiding chains.
    Ismail AE; Stephanopoulos G; Rutledge GC
    J Chem Phys; 2005 Jun; 122(23):234902. PubMed ID: 16008482
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Dynamic force matching: A method for constructing dynamical coarse-grained models with realistic time dependence.
    Davtyan A; Dama JF; Voth GA; Andersen HC
    J Chem Phys; 2015 Apr; 142(15):154104. PubMed ID: 25903863
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Generalized Metropolis acceptance criterion for hybrid non-equilibrium molecular dynamics-Monte Carlo simulations.
    Chen Y; Roux B
    J Chem Phys; 2015 Jan; 142(2):024101. PubMed ID: 25591332
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Stochastic potential switching algorithm for Monte Carlo simulations of complex systems.
    Mak CH
    J Chem Phys; 2005 Jun; 122(21):214110. PubMed ID: 15974731
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Coarse-grained model for phospholipid/cholesterol bilayer employing inverse Monte Carlo with thermodynamic constraints.
    Murtola T; Falck E; Karttunen M; Vattulainen I
    J Chem Phys; 2007 Feb; 126(7):075101. PubMed ID: 17328634
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Monte Carlo simulations of Lennard-Jones nonionic surfactant adsorption at the liquid/vapor interface.
    Howes AJ; Radke CJ
    Langmuir; 2007 Feb; 23(4):1835-44. PubMed ID: 17279664
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Coarse-grained Monte Carlo simulations of the phase transition of the Potts model on weighted networks.
    Shen C; Chen H; Hou Z; Xin H
    Phys Rev E Stat Nonlin Soft Matter Phys; 2011 Jun; 83(6 Pt 2):066109. PubMed ID: 21797443
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Efficient hybrid non-equilibrium molecular dynamics--Monte Carlo simulations with symmetric momentum reversal.
    Chen Y; Roux B
    J Chem Phys; 2014 Sep; 141(11):114107. PubMed ID: 25240345
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Lattice Boltzmann implementation of the three-dimensional Ben-Naim potential for water-like fluids.
    Moradi N; Greiner A; Rao F; Succi S
    J Chem Phys; 2013 Mar; 138(12):124105. PubMed ID: 23556707
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 39.