BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

224 related articles for article (PubMed ID: 23842461)

  • 1. Managing the data deluge: data-driven GO category assignment improves while complexity of functional annotation increases.
    Gobeill J; Pasche E; Vishnyakova D; Ruch P
    Database (Oxford); 2013; 2013():bat041. PubMed ID: 23842461
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Closing the loop: from paper to protein annotation using supervised Gene Ontology classification.
    Gobeill J; Pasche E; Vishnyakova D; Ruch P
    Database (Oxford); 2014; 2014():. PubMed ID: 25190367
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Deep Question Answering for protein annotation.
    Gobeill J; Gaudinat A; Pasche E; Vishnyakova D; Gaudet P; Bairoch A; Ruch P
    Database (Oxford); 2015; 2015():. PubMed ID: 26384372
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Overview of the gene ontology task at BioCreative IV.
    Mao Y; Van Auken K; Li D; Arighi CN; McQuilton P; Hayman GT; Tweedie S; Schaeffer ML; Laulederkind SJ; Wang SJ; Gobeill J; Ruch P; Luu AT; Kim JJ; Chiang JH; Chen YD; Yang CJ; Liu H; Zhu D; Li Y; Yu H; Emadzadeh E; Gonzalez G; Chen JM; Dai HJ; Lu Z
    Database (Oxford); 2014; 2014():. PubMed ID: 25157073
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An evaluation of GO annotation retrieval for BioCreAtIvE and GOA.
    Camon EB; Barrell DG; Dimmer EC; Lee V; Magrane M; Maslen J; Binns D; Apweiler R
    BMC Bioinformatics; 2005; 6 Suppl 1(Suppl 1):S17. PubMed ID: 15960829
    [TBL] [Abstract][Full Text] [Related]  

  • 6. BC4GO: a full-text corpus for the BioCreative IV GO task.
    Van Auken K; Schaeffer ML; McQuilton P; Laulederkind SJ; Li D; Wang SJ; Hayman GT; Tweedie S; Arighi CN; Done J; Müller HM; Sternberg PW; Mao Y; Wei CH; Lu Z
    Database (Oxford); 2014; 2014():. PubMed ID: 25070993
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Evaluation of BioCreAtIvE assessment of task 2.
    Blaschke C; Leon EA; Krallinger M; Valencia A
    BMC Bioinformatics; 2005; 6 Suppl 1(Suppl 1):S16. PubMed ID: 15960828
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Text Mining to Support Gene Ontology Curation and Vice Versa.
    Ruch P
    Methods Mol Biol; 2017; 1446():69-84. PubMed ID: 27812936
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Developing a biocuration workflow for AgBase, a non-model organism database.
    Pillai L; Chouvarine P; Tudor CO; Schmidt CJ; Vijay-Shanker K; McCarthy FM
    Database (Oxford); 2012; 2012():bas038. PubMed ID: 23160411
    [TBL] [Abstract][Full Text] [Related]  

  • 10. neXtA5: accelerating annotation of articles via automated approaches in neXtProt.
    Mottin L; Gobeill J; Pasche E; Michel PA; Cusin I; Gaudet P; Ruch P
    Database (Oxford); 2016; 2016():. PubMed ID: 27374119
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Textpresso Central: a customizable platform for searching, text mining, viewing, and curating biomedical literature.
    Müller HM; Van Auken KM; Li Y; Sternberg PW
    BMC Bioinformatics; 2018 Mar; 19(1):94. PubMed ID: 29523070
    [TBL] [Abstract][Full Text] [Related]  

  • 12. GOAnnotator: linking protein GO annotations to evidence text.
    Couto FM; Silva MJ; Lee V; Dimmer E; Camon E; Apweiler R; Kirsch H; Rebholz-Schuhmann D
    J Biomed Discov Collab; 2006 Dec; 1():19. PubMed ID: 17181854
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Biocuration workflows and text mining: overview of the BioCreative 2012 Workshop Track II.
    Lu Z; Hirschman L
    Database (Oxford); 2012; 2012():bas043. PubMed ID: 23160416
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine.
    Islamaj Dogan R; Kim S; Chatr-Aryamontri A; Wei CH; Comeau DC; Antunes R; Matos S; Chen Q; Elangovan A; Panyam NC; Verspoor K; Liu H; Wang Y; Liu Z; Altinel B; Hüsünbeyi ZM; Özgür A; Fergadis A; Wang CK; Dai HJ; Tran T; Kavuluru R; Luo L; Steppi A; Zhang J; Qu J; Lu Z
    Database (Oxford); 2019 Jan; 2019():. PubMed ID: 30689846
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Overview of the BioCreative VI text-mining services for Kinome Curation Track.
    Gobeill J; Gaudet P; Dopp D; Morrone A; Kahanda I; Hsu YY; Wei CH; Lu Z; Ruch P
    Database (Oxford); 2018 Jan; 2018():. PubMed ID: 30329035
    [TBL] [Abstract][Full Text] [Related]  

  • 16. How to link ontologies and protein-protein interactions to literature: text-mining approaches and the BioCreative experience.
    Krallinger M; Leitner F; Vazquez M; Salgado D; Marcelle C; Tyers M; Valencia A; Chatr-aryamontri A
    Database (Oxford); 2012; 2012():bas017. PubMed ID: 22438567
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Application of text-mining for updating protein post-translational modification annotation in UniProtKB.
    Veuthey AL; Bridge A; Gobeill J; Ruch P; McEntyre JR; Bougueleret L; Xenarios I
    BMC Bioinformatics; 2013 Mar; 14():104. PubMed ID: 23517090
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Automatic consistency assurance for literature-based gene ontology annotation.
    Chen J; Geard N; Zobel J; Verspoor K
    BMC Bioinformatics; 2021 Nov; 22(1):565. PubMed ID: 34823464
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Text-mining-assisted biocuration workflows in Argo.
    Rak R; Batista-Navarro RT; Rowley A; Carter J; Ananiadou S
    Database (Oxford); 2014; 2014():. PubMed ID: 25037308
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PhenoGO: assigning phenotypic context to gene ontology annotations with natural language processing.
    Lussier Y; Borlawsky T; Rappaport D; Liu Y; Friedman C
    Pac Symp Biocomput; 2006; ():64-75. PubMed ID: 17094228
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.