BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

240 related articles for article (PubMed ID: 23842804)

  • 1. Allosite: a method for predicting allosteric sites.
    Huang W; Lu S; Huang Z; Liu X; Mou L; Luo Y; Zhao Y; Liu Y; Chen Z; Hou T; Zhang J
    Bioinformatics; 2013 Sep; 29(18):2357-9. PubMed ID: 23842804
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Alloscore: a method for predicting allosteric ligand-protein interactions.
    Li S; Shen Q; Su M; Liu X; Lu S; Chen Z; Wang R; Zhang J
    Bioinformatics; 2016 May; 32(10):1574-6. PubMed ID: 26803160
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ODORactor: a web server for deciphering olfactory coding.
    Liu X; Su X; Wang F; Huang Z; Wang Q; Li Z; Zhang R; Wu L; Pan Y; Chen Y; Zhuang H; Chen G; Shi T; Zhang J
    Bioinformatics; 2011 Aug; 27(16):2302-3. PubMed ID: 21700676
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Allosteric Methods and Their Applications: Facilitating the Discovery of Allosteric Drugs and the Investigation of Allosteric Mechanisms.
    Lu S; Shen Q; Zhang J
    Acc Chem Res; 2019 Feb; 52(2):492-500. PubMed ID: 30688063
    [TBL] [Abstract][Full Text] [Related]  

  • 5. AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses.
    Huang M; Song K; Liu X; Lu S; Shen Q; Wang R; Gao J; Hong Y; Li Q; Ni D; Xu J; Chen G; Zhang J
    Nucleic Acids Res; 2018 Jul; 46(W1):W451-W458. PubMed ID: 29757429
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Progress in Allosteric Database.
    Song K; Zhang J; Lu S
    Adv Exp Med Biol; 2019; 1163():65-87. PubMed ID: 31707700
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ASD v2.0: updated content and novel features focusing on allosteric regulation.
    Huang Z; Mou L; Shen Q; Lu S; Li C; Liu X; Wang G; Li S; Geng L; Liu Y; Wu J; Chen G; Zhang J
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D510-6. PubMed ID: 24293647
    [TBL] [Abstract][Full Text] [Related]  

  • 8. DoGSiteScorer: a web server for automatic binding site prediction, analysis and druggability assessment.
    Volkamer A; Kuhn D; Rippmann F; Rarey M
    Bioinformatics; 2012 Aug; 28(15):2074-5. PubMed ID: 22628523
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Unraveling allosteric landscapes of allosterome with ASD.
    Liu X; Lu S; Song K; Shen Q; Ni D; Li Q; He X; Zhang H; Wang Q; Chen Y; Li X; Wu J; Sheng C; Chen G; Liu Y; Lu X; Zhang J
    Nucleic Acids Res; 2020 Jan; 48(D1):D394-D401. PubMed ID: 31665428
    [TBL] [Abstract][Full Text] [Related]  

  • 10. AlloReverse: multiscale understanding among hierarchical allosteric regulations.
    Zha J; Li Q; Liu X; Lin W; Wang T; Wei J; Zhang Z; Lu X; Wu J; Ni D; Song K; Zhang L; Lu X; Lu S; Zhang J
    Nucleic Acids Res; 2023 Jul; 51(W1):W33-W38. PubMed ID: 37070199
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CavityPlus: a web server for protein cavity detection with pharmacophore modelling, allosteric site identification and covalent ligand binding ability prediction.
    Xu Y; Wang S; Hu Q; Gao S; Ma X; Zhang W; Shen Y; Chen F; Lai L; Pei J
    Nucleic Acids Res; 2018 Jul; 46(W1):W374-W379. PubMed ID: 29750256
    [TBL] [Abstract][Full Text] [Related]  

  • 12. AlloPred: prediction of allosteric pockets on proteins using normal mode perturbation analysis.
    Greener JG; Sternberg MJ
    BMC Bioinformatics; 2015 Oct; 16():335. PubMed ID: 26493317
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Harnessing allostery: a novel approach to drug discovery.
    Lu S; Li S; Zhang J
    Med Res Rev; 2014 Nov; 34(6):1242-85. PubMed ID: 24827416
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ASD: a comprehensive database of allosteric proteins and modulators.
    Huang Z; Zhu L; Cao Y; Wu G; Liu X; Chen Y; Wang Q; Shi T; Zhao Y; Wang Y; Li W; Li Y; Chen H; Chen G; Zhang J
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D663-9. PubMed ID: 21051350
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks.
    Shen Q; Wang G; Li S; Liu X; Lu S; Chen Z; Song K; Yan J; Geng L; Huang Z; Huang W; Chen G; Zhang J
    Nucleic Acids Res; 2016 Jan; 44(D1):D527-35. PubMed ID: 26365237
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ASD2023: towards the integrating landscapes of allosteric knowledgebase.
    He J; Liu X; Zhu C; Zha J; Li Q; Zhao M; Wei J; Li M; Wu C; Wang J; Jiao Y; Ning S; Zhou J; Hong Y; Liu Y; He H; Zhang M; Chen F; Li Y; He X; Wu J; Lu S; Song K; Lu X; Zhang J
    Nucleic Acids Res; 2024 Jan; 52(D1):D376-D383. PubMed ID: 37870448
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Automatic generation of bioinformatics tools for predicting protein-ligand binding sites.
    Komiyama Y; Banno M; Ueki K; Saad G; Shimizu K
    Bioinformatics; 2016 Mar; 32(6):901-7. PubMed ID: 26545824
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SuccFind: a novel succinylation sites online prediction tool via enhanced characteristic strategy.
    Xu HD; Shi SP; Wen PP; Qiu JD
    Bioinformatics; 2015 Dec; 31(23):3748-50. PubMed ID: 26261224
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Computational Tools for Allosteric Drug Discovery: Site Identification and Focus Library Design.
    Huang W; Nussinov R; Zhang J
    Methods Mol Biol; 2017; 1529():439-446. PubMed ID: 27914066
    [TBL] [Abstract][Full Text] [Related]  

  • 20. AlloSigMA 2: paving the way to designing allosteric effectors and to exploring allosteric effects of mutations.
    Tan ZW; Guarnera E; Tee WV; Berezovsky IN
    Nucleic Acids Res; 2020 Jul; 48(W1):W116-W124. PubMed ID: 32392302
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.