These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

247 related articles for article (PubMed ID: 23862966)

  • 1. Adaptively biased sequential importance sampling for rare events in reaction networks with comparison to exact solutions from finite buffer dCME method.
    Cao Y; Liang J
    J Chem Phys; 2013 Jul; 139(2):025101. PubMed ID: 23862966
    [TBL] [Abstract][Full Text] [Related]  

  • 2. State-dependent biasing method for importance sampling in the weighted stochastic simulation algorithm.
    Roh MK; Gillespie DT; Petzold LR
    J Chem Phys; 2010 Nov; 133(17):174106. PubMed ID: 21054005
    [TBL] [Abstract][Full Text] [Related]  

  • 3. State Space Truncation with Quantified Errors for Accurate Solutions to Discrete Chemical Master Equation.
    Cao Y; Terebus A; Liang J
    Bull Math Biol; 2016 Apr; 78(4):617-661. PubMed ID: 27105653
    [TBL] [Abstract][Full Text] [Related]  

  • 4. ACCURATE CHEMICAL MASTER EQUATION SOLUTION USING MULTI-FINITE BUFFERS.
    Cao Y; Terebus A; Liang J
    Multiscale Model Simul; 2016; 14(2):923-963. PubMed ID: 27761104
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Optimal enumeration of state space of finitely buffered stochastic molecular networks and exact computation of steady state landscape probability.
    Cao Y; Liang J
    BMC Syst Biol; 2008 Mar; 2():30. PubMed ID: 18373871
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Automated estimation of rare event probabilities in biochemical systems.
    Daigle BJ; Roh MK; Gillespie DT; Petzold LR
    J Chem Phys; 2011 Jan; 134(4):044110. PubMed ID: 21280690
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Stochastic parameter search for events.
    Roh MK; Eckhoff P
    BMC Syst Biol; 2014 Nov; 8():126. PubMed ID: 25380984
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Solving the chemical master equation by a fast adaptive finite state projection based on the stochastic simulation algorithm.
    Sidje RB; Vo HD
    Math Biosci; 2015 Nov; 269():10-6. PubMed ID: 26319118
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Estimating rare events in biochemical systems using conditional sampling.
    Sundar VS
    J Chem Phys; 2017 Jan; 146(4):044117. PubMed ID: 28147534
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Accelerated maximum likelihood parameter estimation for stochastic biochemical systems.
    Daigle BJ; Roh MK; Petzold LR; Niemi J
    BMC Bioinformatics; 2012 May; 13():68. PubMed ID: 22548918
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Mechanisms of stochastic focusing and defocusing in biological reaction networks: insight from accurate chemical master equation (ACME) solutions.
    Gursoy G; Terebus A; Youfang Cao ; Jie Liang
    Annu Int Conf IEEE Eng Med Biol Soc; 2016 Aug; 2016():1480-1483. PubMed ID: 28268606
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Accurate hybrid stochastic simulation of a system of coupled chemical or biochemical reactions.
    Salis H; Kaznessis Y
    J Chem Phys; 2005 Feb; 122(5):54103. PubMed ID: 15740306
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Exact computation of probability landscape of stochastic networks of Single Input and Coupled Toggle Switch Modules.
    Terebus A; Cao Y; Liang J
    Annu Int Conf IEEE Eng Med Biol Soc; 2014; 2014():5228-31. PubMed ID: 25571172
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Efficient computation of parameter sensitivities of discrete stochastic chemical reaction networks.
    Rathinam M; Sheppard PW; Khammash M
    J Chem Phys; 2010 Jan; 132(3):034103. PubMed ID: 20095724
    [TBL] [Abstract][Full Text] [Related]  

  • 15. DeepCME: A deep learning framework for computing solution statistics of the chemical master equation.
    Gupta A; Schwab C; Khammash M
    PLoS Comput Biol; 2021 Dec; 17(12):e1009623. PubMed ID: 34879062
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Path ensembles and path sampling in nonequilibrium stochastic systems.
    Harland B; Sun SX
    J Chem Phys; 2007 Sep; 127(10):104103. PubMed ID: 17867733
    [TBL] [Abstract][Full Text] [Related]  

  • 17. State-dependent doubly weighted stochastic simulation algorithm for automatic characterization of stochastic biochemical rare events.
    Roh MK; Daigle BJ; Gillespie DT; Petzold LR
    J Chem Phys; 2011 Dec; 135(23):234108. PubMed ID: 22191865
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Data-Driven Method for Efficient Characterization of Rare Event Probabilities in Biochemical Systems.
    Roh MK
    Bull Math Biol; 2019 Aug; 81(8):3097-3120. PubMed ID: 30225593
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An efficient finite-difference strategy for sensitivity analysis of stochastic models of biochemical systems.
    Morshed M; Ingalls B; Ilie S
    Biosystems; 2017 Jan; 151():43-52. PubMed ID: 27914944
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A Comparison of Weighted Stochastic Simulation Methods for the Analysis of Genetic Circuits.
    Ahmadi M; Thomas PJ; Buecherl L; Winstead C; Myers CJ; Zheng H
    ACS Synth Biol; 2023 Jan; 12(1):287-304. PubMed ID: 36583529
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.