These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
155 related articles for article (PubMed ID: 23890051)
1. Pathprinting: An integrative approach to understand the functional basis of disease. Altschuler GM; Hofmann O; Kalatskaya I; Payne R; Ho Sui SJ; Saxena U; Krivtsov AV; Armstrong SA; Cai T; Stein L; Hide WA Genome Med; 2013; 5(7):68. PubMed ID: 23890051 [TBL] [Abstract][Full Text] [Related]
2. Statistical Test of Expression Pattern (STEPath): a new strategy to integrate gene expression data with genomic information in individual and meta-analysis studies. Martini P; Risso D; Sales G; Romualdi C; Lanfranchi G; Cagnin S BMC Bioinformatics; 2011 Apr; 12():92. PubMed ID: 21481242 [TBL] [Abstract][Full Text] [Related]
3. Plant Omics Data Center: an integrated web repository for interspecies gene expression networks with NLP-based curation. Ohyanagi H; Takano T; Terashima S; Kobayashi M; Kanno M; Morimoto K; Kanegae H; Sasaki Y; Saito M; Asano S; Ozaki S; Kudo T; Yokoyama K; Aya K; Suwabe K; Suzuki G; Aoki K; Kubo Y; Watanabe M; Matsuoka M; Yano K Plant Cell Physiol; 2015 Jan; 56(1):e9. PubMed ID: 25505034 [TBL] [Abstract][Full Text] [Related]
4. Understanding cellular function and disease with comparative pathway analysis. Davis MJ; Ragan MA Genome Med; 2013; 5(7):64. PubMed ID: 23889971 [TBL] [Abstract][Full Text] [Related]
5. IntPath--an integrated pathway gene relationship database for model organisms and important pathogens. Zhou H; Jin J; Zhang H; Yi B; Wozniak M; Wong L BMC Syst Biol; 2012; 6 Suppl 2(Suppl 2):S2. PubMed ID: 23282057 [TBL] [Abstract][Full Text] [Related]
6. Detailing regulatory networks through large scale data integration. Huttenhower C; Mutungu KT; Indik N; Yang W; Schroeder M; Forman JJ; Troyanskaya OG; Coller HA Bioinformatics; 2009 Dec; 25(24):3267-74. PubMed ID: 19825796 [TBL] [Abstract][Full Text] [Related]
7. Identification of epigenetic modifications that contribute to pathogenesis in therapy-related AML: Effective integration of genome-wide histone modification with transcriptional profiles. Yang XH; Wang B; Cunningham JM BMC Med Genomics; 2015; 8 Suppl 2(Suppl 2):S6. PubMed ID: 26043758 [TBL] [Abstract][Full Text] [Related]
8. A Protocol for the Construction and Curation of Genome-Scale Integrated Metabolic and Regulatory Network Models. Chandrasekaran S Methods Mol Biol; 2019; 1927():203-214. PubMed ID: 30788794 [TBL] [Abstract][Full Text] [Related]
9. Integrative analysis of RUNX1 downstream pathways and target genes. Michaud J; Simpson KM; Escher R; Buchet-Poyau K; Beissbarth T; Carmichael C; Ritchie ME; Schütz F; Cannon P; Liu M; Shen X; Ito Y; Raskind WH; Horwitz MS; Osato M; Turner DR; Speed TP; Kavallaris M; Smyth GK; Scott HS BMC Genomics; 2008 Jul; 9():363. PubMed ID: 18671852 [TBL] [Abstract][Full Text] [Related]
10. Functional annotation from predicted protein interaction networks. McDermott J; Bumgarner R; Samudrala R Bioinformatics; 2005 Aug; 21(15):3217-26. PubMed ID: 15919725 [TBL] [Abstract][Full Text] [Related]
11. STARNET 2: a web-based tool for accelerating discovery of gene regulatory networks using microarray co-expression data. Jupiter D; Chen H; VanBuren V BMC Bioinformatics; 2009 Oct; 10():332. PubMed ID: 19828039 [TBL] [Abstract][Full Text] [Related]
12. Cross-species and cross-platform gene expression studies with the Bioconductor-compliant R package 'annotationTools'. Kuhn A; Luthi-Carter R; Delorenzi M BMC Bioinformatics; 2008 Jan; 9():26. PubMed ID: 18201381 [TBL] [Abstract][Full Text] [Related]
13. Gene Expression Browser: large-scale and cross-experiment microarray data integration, management, search & visualization. Zhang M; Zhang Y; Liu L; Yu L; Tsang S; Tan J; Yao W; Kang MS; An Y; Fan X BMC Bioinformatics; 2010 Aug; 11():433. PubMed ID: 20727159 [TBL] [Abstract][Full Text] [Related]
14. Finding biomarkers in non-model species: literature mining of transcription factors involved in bovine embryo development. Turenne N; Tiys E; Ivanisenko V; Yudin N; Ignatieva E; Valour D; Degrelle SA; Hue I BioData Min; 2012 Aug; 5(1):12. PubMed ID: 22931563 [TBL] [Abstract][Full Text] [Related]
17. FNTM: a server for predicting functional networks of tissues in mouse. Goya J; Wong AK; Yao V; Krishnan A; Homilius M; Troyanskaya OG Nucleic Acids Res; 2015 Jul; 43(W1):W182-7. PubMed ID: 25940632 [TBL] [Abstract][Full Text] [Related]
18. Integrative meta-analysis of differential gene expression in acute myeloid leukemia. Miller BG; Stamatoyannopoulos JA PLoS One; 2010 Mar; 5(3):e9466. PubMed ID: 20209125 [TBL] [Abstract][Full Text] [Related]