These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

398 related articles for article (PubMed ID: 23912058)

  • 1. AlienTrimmer: a tool to quickly and accurately trim off multiple short contaminant sequences from high-throughput sequencing reads.
    Criscuolo A; Brisse S
    Genomics; 2013; 102(5-6):500-6. PubMed ID: 23912058
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Btrim: a fast, lightweight adapter and quality trimming program for next-generation sequencing technologies.
    Kong Y
    Genomics; 2011 Aug; 98(2):152-3. PubMed ID: 21651976
    [TBL] [Abstract][Full Text] [Related]  

  • 3. cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing.
    Kechin A; Boyarskikh U; Kel A; Filipenko M
    J Comput Biol; 2017 Nov; 24(11):1138-1143. PubMed ID: 28715235
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Analysis of high-throughput ancient DNA sequencing data.
    Kircher M
    Methods Mol Biol; 2012; 840():197-228. PubMed ID: 22237537
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SeqPurge: highly-sensitive adapter trimming for paired-end NGS data.
    Sturm M; Schroeder C; Bauer P
    BMC Bioinformatics; 2016 May; 17():208. PubMed ID: 27161244
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads.
    Jiang H; Lei R; Ding SW; Zhu S
    BMC Bioinformatics; 2014 Jun; 15():182. PubMed ID: 24925680
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Bayexer: an accurate and fast Bayesian demultiplexer for Illumina sequences.
    Yi H; Li Z; Li T; Zhao J
    Bioinformatics; 2015 Dec; 31(24):4000-2. PubMed ID: 26315903
    [TBL] [Abstract][Full Text] [Related]  

  • 8. ClinQC: a tool for quality control and cleaning of Sanger and NGS data in clinical research.
    Pandey RV; Pabinger S; Kriegner A; Weinhäusel A
    BMC Bioinformatics; 2016 Feb; 17():56. PubMed ID: 26830926
    [TBL] [Abstract][Full Text] [Related]  

  • 9. pIRS: Profile-based Illumina pair-end reads simulator.
    Hu X; Yuan J; Shi Y; Lu J; Liu B; Li Z; Chen Y; Mu D; Zhang H; Li N; Yue Z; Bai F; Li H; Fan W
    Bioinformatics; 2012 Jun; 28(11):1533-5. PubMed ID: 22508794
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MOM: maximum oligonucleotide mapping.
    Eaves HL; Gao Y
    Bioinformatics; 2009 Apr; 25(7):969-70. PubMed ID: 19228804
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PEAT: an intelligent and efficient paired-end sequencing adapter trimming algorithm.
    Li YL; Weng JC; Hsiao CC; Chou MT; Tseng CW; Hung JH
    BMC Bioinformatics; 2015; 16 Suppl 1(Suppl 1):S2. PubMed ID: 25707528
    [TBL] [Abstract][Full Text] [Related]  

  • 12. pTrimmer: An efficient tool to trim primers of multiplex deep sequencing data.
    Zhang X; Shao Y; Tian J; Liao Y; Li P; Zhang Y; Chen J; Li Z
    BMC Bioinformatics; 2019 May; 20(1):236. PubMed ID: 31077131
    [TBL] [Abstract][Full Text] [Related]  

  • 13. AdapterRemoval v2: rapid adapter trimming, identification, and read merging.
    Schubert M; Lindgreen S; Orlando L
    BMC Res Notes; 2016 Feb; 9():88. PubMed ID: 26868221
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RF: a method for filtering short reads with tandem repeats for genome mapping.
    Misawa K
    Genomics; 2013 Jul; 102(1):35-7. PubMed ID: 23542167
    [TBL] [Abstract][Full Text] [Related]  

  • 15. QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform.
    Shrestha RK; Lubinsky B; Bansode VB; Moinz MB; McCormack GP; Travers SA
    BMC Bioinformatics; 2014 Jan; 15():33. PubMed ID: 24479419
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data.
    Miller MP; Knaus BJ; Mullins TD; Haig SM
    J Hered; 2013; 104(6):881-5. PubMed ID: 24052535
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Konnector v2.0: pseudo-long reads from paired-end sequencing data.
    Vandervalk BP; Yang C; Xue Z; Raghavan K; Chu J; Mohamadi H; Jackman SD; Chiu R; Warren RL; Birol I
    BMC Med Genomics; 2015; 8 Suppl 3(Suppl 3):S1. PubMed ID: 26399504
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Correction of sequencing errors in a mixed set of reads.
    Salmela L
    Bioinformatics; 2010 May; 26(10):1284-90. PubMed ID: 20378555
    [TBL] [Abstract][Full Text] [Related]  

  • 19. EDAR: an efficient error detection and removal algorithm for next generation sequencing data.
    Zhao X; Palmer LE; Bolanos R; Mircean C; Fasulo D; Wittenberg GM
    J Comput Biol; 2010 Nov; 17(11):1549-60. PubMed ID: 20973743
    [TBL] [Abstract][Full Text] [Related]  

  • 20. NxTrim: optimized trimming of Illumina mate pair reads.
    O'Connell J; Schulz-Trieglaff O; Carlson E; Hims MM; Gormley NA; Cox AJ
    Bioinformatics; 2015 Jun; 31(12):2035-7. PubMed ID: 25661542
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 20.