These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

180 related articles for article (PubMed ID: 23929030)

  • 1. WebRASP: a server for computing energy scores to assess the accuracy and stability of RNA 3D structures.
    Norambuena T; Cares JF; Capriotti E; Melo F
    Bioinformatics; 2013 Oct; 29(20):2649-50. PubMed ID: 23929030
    [TBL] [Abstract][Full Text] [Related]  

  • 2. WebSTAR3D: a web server for RNA 3D structural alignment.
    Holzhauser E; Ge P; Zhang S
    Bioinformatics; 2016 Dec; 32(23):3673-3675. PubMed ID: 27497443
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ModeRNA server: an online tool for modeling RNA 3D structures.
    Rother M; Milanowska K; Puton T; Jeleniewicz J; Rother K; Bujnicki JM
    Bioinformatics; 2011 Sep; 27(17):2441-2. PubMed ID: 21727140
    [TBL] [Abstract][Full Text] [Related]  

  • 4. NPDock: a web server for protein-nucleic acid docking.
    Tuszynska I; Magnus M; Jonak K; Dawson W; Bujnicki JM
    Nucleic Acids Res; 2015 Jul; 43(W1):W425-30. PubMed ID: 25977296
    [TBL] [Abstract][Full Text] [Related]  

  • 5. VfoldLA: A web server for loop assembly-based prediction of putative 3D RNA structures.
    Xu X; Zhao C; Chen SJ
    J Struct Biol; 2019 Sep; 207(3):235-240. PubMed ID: 31173857
    [TBL] [Abstract][Full Text] [Related]  

  • 6. DSSR-enhanced visualization of nucleic acid structures in Jmol.
    Hanson RM; Lu XJ
    Nucleic Acids Res; 2017 Jul; 45(W1):W528-W533. PubMed ID: 28472503
    [TBL] [Abstract][Full Text] [Related]  

  • 7. MultiSETTER: web server for multiple RNA structure comparison.
    Čech P; Hoksza D; Svozil D
    BMC Bioinformatics; 2015 Aug; 16():253. PubMed ID: 26264783
    [TBL] [Abstract][Full Text] [Related]  

  • 8. RNA-TVcurve: a Web server for RNA secondary structure comparison based on a multi-scale similarity of its triple vector curve representation.
    Li Y; Shi X; Liang Y; Xie J; Zhang Y; Ma Q
    BMC Bioinformatics; 2017 Jan; 18(1):51. PubMed ID: 28109252
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SETTER: web server for RNA structure comparison.
    Cech P; Svozil D; Hoksza D
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W42-8. PubMed ID: 22693209
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Vfold: a web server for RNA structure and folding thermodynamics prediction.
    Xu X; Zhao P; Chen SJ
    PLoS One; 2014; 9(9):e107504. PubMed ID: 25215508
    [TBL] [Abstract][Full Text] [Related]  

  • 11. HNADOCK: a nucleic acid docking server for modeling RNA/DNA-RNA/DNA 3D complex structures.
    He J; Wang J; Tao H; Xiao Y; Huang SY
    Nucleic Acids Res; 2019 Jul; 47(W1):W35-W42. PubMed ID: 31114906
    [TBL] [Abstract][Full Text] [Related]  

  • 12. 3dSS: 3D structural superposition.
    Sumathi K; Ananthalakshmi P; Roshan MN; Sekar K
    Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W128-32. PubMed ID: 16844975
    [TBL] [Abstract][Full Text] [Related]  

  • 13. FoldNucleus: web server for the prediction of RNA and protein folding nuclei from their 3D structures.
    Pereyaslavets LB; Sokolovsky IV; Galzitskaya OV
    Bioinformatics; 2015 Oct; 31(20):3374-6. PubMed ID: 26104744
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RASS: a web server for RNA alignment in the joint sequence-structure space.
    He G; Steppi A; Laborde J; Srivastava A; Zhao P; Zhang J
    Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W377-81. PubMed ID: 24831547
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNAssess--a web server for quality assessment of RNA 3D structures.
    Lukasiak P; Antczak M; Ratajczak T; Szachniuk M; Popenda M; Adamiak RW; Blazewicz J
    Nucleic Acids Res; 2015 Jul; 43(W1):W502-6. PubMed ID: 26068469
    [TBL] [Abstract][Full Text] [Related]  

  • 16. R3D Align web server for global nucleotide to nucleotide alignments of RNA 3D structures.
    Rahrig RR; Petrov AI; Leontis NB; Zirbel CL
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W15-21. PubMed ID: 23716643
    [TBL] [Abstract][Full Text] [Related]  

  • 17. TBI server: a web server for predicting ion effects in RNA folding.
    Zhu Y; He Z; Chen SJ
    PLoS One; 2015; 10(3):e0119705. PubMed ID: 25798933
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Web 3DNA--a web server for the analysis, reconstruction, and visualization of three-dimensional nucleic-acid structures.
    Zheng G; Lu XJ; Olson WK
    Nucleic Acids Res; 2009 Jul; 37(Web Server issue):W240-6. PubMed ID: 19474339
    [TBL] [Abstract][Full Text] [Related]  

  • 19. NASSAM: a server to search for and annotate tertiary interactions and motifs in three-dimensional structures of complex RNA molecules.
    Hamdani HY; Appasamy SD; Willett P; Artymiuk PJ; Firdaus-Raih M
    Nucleic Acids Res; 2012 Jul; 40(Web Server issue):W35-41. PubMed ID: 22661578
    [TBL] [Abstract][Full Text] [Related]  

  • 20. 3dRNA v2.0: An Updated Web Server for RNA 3D Structure Prediction.
    Wang J; Wang J; Huang Y; Xiao Y
    Int J Mol Sci; 2019 Aug; 20(17):. PubMed ID: 31450739
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.