These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

274 related articles for article (PubMed ID: 23933229)

  • 1. Emerging computational approaches for the study of protein allostery.
    Collier G; Ortiz V
    Arch Biochem Biophys; 2013 Oct; 538(1):6-15. PubMed ID: 23933229
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Studying allosteric regulation in metal sensor proteins using computational methods.
    Chakravorty DK; Merz KM
    Adv Protein Chem Struct Biol; 2014; 96():181-218. PubMed ID: 25443958
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Looking for a sequence based allostery definition: a statistical journey at different resolution scales.
    Namboodiri S; Giuliani A; Nair AS; Dhar PK
    J Theor Biol; 2012 Jul; 304():211-8. PubMed ID: 22484347
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Allostery and conformational free energy changes in human tryptophanyl-tRNA synthetase from essential dynamics and structure networks.
    Bhattacharyya M; Ghosh A; Hansia P; Vishveshwara S
    Proteins; 2010 Feb; 78(3):506-17. PubMed ID: 19768679
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Computational methods for studying serpin conformational change and structural plasticity.
    Kass I; Reboul CF; Buckle AM
    Methods Enzymol; 2011; 501():295-323. PubMed ID: 22078540
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Computational approach to de novo discovery of fragment binding for novel protein states.
    Konteatis ZD; Klon AE; Zou J; Meshkat S
    Methods Enzymol; 2011; 493():357-80. PubMed ID: 21371598
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Is allostery an intrinsic property of all dynamic proteins?
    Gunasekaran K; Ma B; Nussinov R
    Proteins; 2004 Nov; 57(3):433-43. PubMed ID: 15382234
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Protein conformational transitions coupled to binding in molecular recognition of unstructured proteins: deciphering the effect of intermolecular interactions on computational structure prediction of the p27Kip1 protein bound to the cyclin A-cyclin-dependent kinase 2 complex.
    Verkhivker GM
    Proteins; 2005 Feb; 58(3):706-16. PubMed ID: 15609350
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Sparse networks of directly coupled, polymorphic, and functional side chains in allosteric proteins.
    Soltan Ghoraie L; Burkowski F; Zhu M
    Proteins; 2015 Mar; 83(3):497-516. PubMed ID: 25545075
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Protein function and allostery: a dynamic relationship.
    Kalodimos CG
    Ann N Y Acad Sci; 2012 Jul; 1260():81-6. PubMed ID: 22256894
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Theoretical and computational protein design.
    Samish I; MacDermaid CM; Perez-Aguilar JM; Saven JG
    Annu Rev Phys Chem; 2011; 62():129-49. PubMed ID: 21128762
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Recent computational advances in the identification of allosteric sites in proteins.
    Lu S; Huang W; Zhang J
    Drug Discov Today; 2014 Oct; 19(10):1595-600. PubMed ID: 25107670
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Toward an understanding of the sequence and structural basis of allosteric proteins.
    Li X; Chen Y; Lu S; Huang Z; Liu X; Wang Q; Shi T; Zhang J
    J Mol Graph Model; 2013 Mar; 40():30-9. PubMed ID: 23337573
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Exploring and Learning the Universe of Protein Allostery Using Artificial Intelligence Augmented Biophysical and Computational Approaches.
    Agajanian S; Alshahrani M; Bai F; Tao P; Verkhivker GM
    J Chem Inf Model; 2023 Mar; 63(5):1413-1428. PubMed ID: 36827465
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A restraint molecular dynamics and simulated annealing approach for protein homology modeling utilizing mean angles.
    Möglich A; Weinfurtner D; Maurer T; Gronwald W; Kalbitzer HR
    BMC Bioinformatics; 2005 Apr; 6():91. PubMed ID: 15819976
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Allostery in protein domains reflects a balance of steric and hydrophobic effects.
    England JL
    Structure; 2011 Jul; 19(7):967-75. PubMed ID: 21742263
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Recent developments in structural proteomics for protein structure determination.
    Liu HL; Hsu JP
    Proteomics; 2005 May; 5(8):2056-68. PubMed ID: 15846841
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Characterization of the denaturation of human alpha-lactalbumin in urea by molecular dynamics simulations.
    Smith LJ; Jones RM; van Gunsteren WF
    Proteins; 2005 Feb; 58(2):439-49. PubMed ID: 15558602
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Characterization of protein-ligand interaction sites using experimental and computational methods.
    Vajda S; Guarnieri F
    Curr Opin Drug Discov Devel; 2006 May; 9(3):354-62. PubMed ID: 16729732
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Constrained geometric simulation of diffusive motion in proteins.
    Wells S; Menor S; Hespenheide B; Thorpe MF
    Phys Biol; 2005 Nov; 2(4):S127-36. PubMed ID: 16280618
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.