These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

89 related articles for article (PubMed ID: 23934827)

  • 21. Beyond rotamers: a generative, probabilistic model of side chains in proteins.
    Harder T; Boomsma W; Paluszewski M; Frellsen J; Johansson KE; Hamelryck T
    BMC Bioinformatics; 2010 Jun; 11():306. PubMed ID: 20525384
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Predicting protein secondary structure with probabilistic schemata of evolutionarily derived information.
    Thompson MJ; Goldstein RA
    Protein Sci; 1997 Sep; 6(9):1963-75. PubMed ID: 9300496
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Ab initio construction of protein tertiary structures using a hierarchical approach.
    Xia Y; Huang ES; Levitt M; Samudrala R
    J Mol Biol; 2000 Jun; 300(1):171-85. PubMed ID: 10864507
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Probabilistic sampling of protein conformations: new hope for brute force?
    Feldman HJ; Hogue CW
    Proteins; 2002 Jan; 46(1):8-23. PubMed ID: 11746699
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Native atomic burials, supplemented by physically motivated hydrogen bond constraints, contain sufficient information to determine the tertiary structure of small globular proteins.
    Pereira de Araújo AF; Gomes AL; Bursztyn AA; Shakhnovich EI
    Proteins; 2008 Feb; 70(3):971-83. PubMed ID: 17847091
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Estimating quality of template-based protein models by alignment stability.
    Chen H; Kihara D
    Proteins; 2008 May; 71(3):1255-74. PubMed ID: 18041762
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins.
    Abagyan R; Totrov M
    J Mol Biol; 1994 Jan; 235(3):983-1002. PubMed ID: 8289329
    [TBL] [Abstract][Full Text] [Related]  

  • 28. The protein local optimization program and G-protein-coupled receptors: loop restoration and applications to homology modeling.
    Goldfeld DA; Friesner RA
    Methods Enzymol; 2013; 522():1-20. PubMed ID: 23374177
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Statistical potentials for improved structurally constrained evolutionary models.
    Kleinman CL; Rodrigue N; Lartillot N; Philippe H
    Mol Biol Evol; 2010 Jul; 27(7):1546-60. PubMed ID: 20159780
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Prediction of protein secondary structure content for the twilight zone sequences.
    Homaeian L; Kurgan LA; Ruan J; Cios KJ; Chen K
    Proteins; 2007 Nov; 69(3):486-98. PubMed ID: 17623861
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Global stability of protein folding from an empirical free energy function.
    Ruiz-Blanco YB; Marrero-Ponce Y; Paz W; García Y; Salgado J
    J Theor Biol; 2013 Mar; 321():44-53. PubMed ID: 23313334
    [TBL] [Abstract][Full Text] [Related]  

  • 32. FragQA: predicting local fragment quality of a sequence-structure alignment.
    Gao X; Bu D; Li SC; Xu J; Li M
    Genome Inform; 2007; 19():27-39. PubMed ID: 18546502
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Estimation of protein folding free energy barriers from calorimetric data by multi-model Bayesian analysis.
    Naganathan AN; Perez-Jimenez R; Muñoz V; Sanchez-Ruiz JM
    Phys Chem Chem Phys; 2011 Oct; 13(38):17064-76. PubMed ID: 21769353
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Free energy determinants of secondary structure formation: I. alpha-Helices.
    Yang AS; Honig B
    J Mol Biol; 1995 Sep; 252(3):351-65. PubMed ID: 7563056
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Homology modeling by the ICM method.
    Cardozo T; Totrov M; Abagyan R
    Proteins; 1995 Nov; 23(3):403-14. PubMed ID: 8710833
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Progress in protein-protein docking: atomic resolution predictions in the CAPRI experiment using RosettaDock with an improved treatment of side-chain flexibility.
    Schueler-Furman O; Wang C; Baker D
    Proteins; 2005 Aug; 60(2):187-94. PubMed ID: 15981249
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Protein structure prediction begins well but ends badly.
    Saunders R; Deane CM
    Proteins; 2010 Apr; 78(5):1282-90. PubMed ID: 20014025
    [TBL] [Abstract][Full Text] [Related]  

  • 38. A continuum model for protein-protein interactions: application to the docking problem.
    Jackson RM; Sternberg MJ
    J Mol Biol; 1995 Jul; 250(2):258-75. PubMed ID: 7541840
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Development of an ab initio protein structure prediction system ABLE.
    Ishida T; Nishimura T; Nozaki M; Inoue T; Terada T; Nakamura S; Shimizu K
    Genome Inform; 2003; 14():228-37. PubMed ID: 15706537
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Combining evolutionary and structural information for local protein structure prediction.
    Pei J; Grishin NV
    Proteins; 2004 Sep; 56(4):782-94. PubMed ID: 15281130
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 5.