These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

192 related articles for article (PubMed ID: 23935056)

  • 1. Version 6 of the consensus yeast metabolic network refines biochemical coverage and improves model performance.
    Heavner BD; Smallbone K; Price ND; Walker LP
    Database (Oxford); 2013; 2013():bat059. PubMed ID: 23935056
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Yeast 5 - an expanded reconstruction of the Saccharomyces cerevisiae metabolic network.
    Heavner BD; Smallbone K; Barker B; Mendes P; Walker LP
    BMC Syst Biol; 2012 Jun; 6():55. PubMed ID: 22663945
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Further developments towards a genome-scale metabolic model of yeast.
    Dobson PD; Smallbone K; Jameson D; Simeonidis E; Lanthaler K; Pir P; Lu C; Swainston N; Dunn WB; Fisher P; Hull D; Brown M; Oshota O; Stanford NJ; Kell DB; King RD; Oliver SG; Stevens RD; Mendes P
    BMC Syst Biol; 2010 Oct; 4():145. PubMed ID: 21029416
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparative Analysis of Yeast Metabolic Network Models Highlights Progress, Opportunities for Metabolic Reconstruction.
    Heavner BD; Price ND
    PLoS Comput Biol; 2015 Nov; 11(11):e1004530. PubMed ID: 26566239
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Mapping condition-dependent regulation of metabolism in yeast through genome-scale modeling.
    Österlund T; Nookaew I; Bordel S; Nielsen J
    BMC Syst Biol; 2013 Apr; 7():36. PubMed ID: 23631471
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MicrobesFlux: a web platform for drafting metabolic models from the KEGG database.
    Feng X; Xu Y; Chen Y; Tang YJ
    BMC Syst Biol; 2012 Aug; 6():94. PubMed ID: 22857267
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Integration of a constraint-based metabolic model of Brassica napus developing seeds with (13)C-metabolic flux analysis.
    Hay JO; Shi H; Heinzel N; Hebbelmann I; Rolletschek H; Schwender J
    Front Plant Sci; 2014; 5():724. PubMed ID: 25566296
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-scale reconstruction of the Saccharomyces cerevisiae metabolic network.
    Förster J; Famili I; Fu P; Palsson BØ; Nielsen J
    Genome Res; 2003 Feb; 13(2):244-53. PubMed ID: 12566402
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dynamic flux balance analysis of the metabolism of Saccharomyces cerevisiae during the shift from fully respirative or respirofermentative metabolic states to anaerobiosis.
    Jouhten P; Wiebe M; Penttilä M
    FEBS J; 2012 Sep; 279(18):3338-54. PubMed ID: 22672422
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Improving the iMM904 S. cerevisiae metabolic model using essentiality and synthetic lethality data.
    Zomorrodi AR; Maranas CD
    BMC Syst Biol; 2010 Dec; 4():178. PubMed ID: 21190580
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ICON-GEMs: integration of co-expression network in genome-scale metabolic models, shedding light through systems biology.
    Paklao T; Suratanee A; Plaimas K
    BMC Bioinformatics; 2023 Dec; 24(1):492. PubMed ID: 38129786
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Whole genome sequencing of Saccharomyces cerevisiae: from genotype to phenotype for improved metabolic engineering applications.
    Otero JM; Vongsangnak W; Asadollahi MA; Olivares-Hernandes R; Maury J; Farinelli L; Barlocher L; Osterås M; Schalk M; Clark A; Nielsen J
    BMC Genomics; 2010 Dec; 11():723. PubMed ID: 21176163
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evaluation of predicted network modules in yeast metabolism using NMR-based metabolite profiling.
    Bundy JG; Papp B; Harmston R; Browne RA; Clayson EM; Burton N; Reece RJ; Oliver SG; Brindle KM
    Genome Res; 2007 Apr; 17(4):510-9. PubMed ID: 17339370
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.
    Herrgård MJ; Swainston N; Dobson P; Dunn WB; Arga KY; Arvas M; Blüthgen N; Borger S; Costenoble R; Heinemann M; Hucka M; Le Novère N; Li P; Liebermeister W; Mo ML; Oliveira AP; Petranovic D; Pettifer S; Simeonidis E; Smallbone K; Spasić I; Weichart D; Brent R; Broomhead DS; Westerhoff HV; Kirdar B; Penttilä M; Klipp E; Palsson BØ; Sauer U; Oliver SG; Mendes P; Nielsen J; Kell DB
    Nat Biotechnol; 2008 Oct; 26(10):1155-60. PubMed ID: 18846089
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Automated generation of genome-scale metabolic draft reconstructions based on KEGG.
    Karlsen E; Schulz C; Almaas E
    BMC Bioinformatics; 2018 Dec; 19(1):467. PubMed ID: 30514205
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Sampling the solution space in genome-scale metabolic networks reveals transcriptional regulation in key enzymes.
    Bordel S; Agren R; Nielsen J
    PLoS Comput Biol; 2010 Jul; 6(7):e1000859. PubMed ID: 20657658
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Using bioconductor package BiGGR for metabolic flux estimation based on gene expression changes in brain.
    Gavai AK; Supandi F; Hettling H; Murrell P; Leunissen JA; van Beek JH
    PLoS One; 2015; 10(3):e0119016. PubMed ID: 25806817
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Rewired cellular signaling coordinates sugar and hypoxic responses for anaerobic xylose fermentation in yeast.
    Myers KS; Riley NM; MacGilvray ME; Sato TK; McGee M; Heilberger J; Coon JJ; Gasch AP
    PLoS Genet; 2019 Mar; 15(3):e1008037. PubMed ID: 30856163
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Systematic integration of experimental data and models in systems biology.
    Li P; Dada JO; Jameson D; Spasic I; Swainston N; Carroll K; Dunn W; Khan F; Malys N; Messiha HL; Simeonidis E; Weichart D; Winder C; Wishart J; Broomhead DS; Goble CA; Gaskell SJ; Kell DB; Westerhoff HV; Mendes P; Paton NW
    BMC Bioinformatics; 2010 Nov; 11():582. PubMed ID: 21114840
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Engineering acetyl coenzyme A supply: functional expression of a bacterial pyruvate dehydrogenase complex in the cytosol of Saccharomyces cerevisiae.
    Kozak BU; van Rossum HM; Luttik MA; Akeroyd M; Benjamin KR; Wu L; de Vries S; Daran JM; Pronk JT; van Maris AJ
    mBio; 2014 Oct; 5(5):e01696-14. PubMed ID: 25336454
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.