556 related articles for article (PubMed ID: 24053776)
1. Predicting gene regulatory networks of soybean nodulation from RNA-Seq transcriptome data.
Zhu M; Dahmen JL; Stacey G; Cheng J
BMC Bioinformatics; 2013 Sep; 14():278. PubMed ID: 24053776
[TBL] [Abstract][Full Text] [Related]
2. Reconstructing differentially co-expressed gene modules and regulatory networks of soybean cells.
Zhu M; Deng X; Joshi T; Xu D; Stacey G; Cheng J
BMC Genomics; 2012 Aug; 13():437. PubMed ID: 22938179
[TBL] [Abstract][Full Text] [Related]
3. SFGD: a comprehensive platform for mining functional information from soybean transcriptome data and its use in identifying acyl-lipid metabolism pathways.
Yu J; Zhang Z; Wei J; Ling Y; Xu W; Su Z
BMC Genomics; 2014 Apr; 15():271. PubMed ID: 24712981
[TBL] [Abstract][Full Text] [Related]
4. SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis.
Johnson BK; Scholz MB; Teal TK; Abramovitch RB
BMC Bioinformatics; 2016 Feb; 17():66. PubMed ID: 26847232
[TBL] [Abstract][Full Text] [Related]
5. Step-by-Step Construction of Gene Co-expression Networks from High-Throughput Arabidopsis RNA Sequencing Data.
Contreras-López O; Moyano TC; Soto DC; Gutiérrez RA
Methods Mol Biol; 2018; 1761():275-301. PubMed ID: 29525965
[TBL] [Abstract][Full Text] [Related]
6. Using RNA-Seq to profile soybean seed development from fertilization to maturity.
Jones SI; Vodkin LO
PLoS One; 2013; 8(3):e59270. PubMed ID: 23555009
[TBL] [Abstract][Full Text] [Related]
7. Genome-wide identification of binding sites for NAC and YABBY transcription factors and co-regulated genes during soybean seedling development by ChIP-Seq and RNA-Seq.
Shamimuzzaman M; Vodkin L
BMC Genomics; 2013 Jul; 14():477. PubMed ID: 23865409
[TBL] [Abstract][Full Text] [Related]
8. Whole genome co-expression analysis of soybean cytochrome P450 genes identifies nodulation-specific P450 monooxygenases.
Guttikonda SK; Trupti J; Bisht NC; Chen H; An YQ; Pandey S; Xu D; Yu O
BMC Plant Biol; 2010 Nov; 10():243. PubMed ID: 21062474
[TBL] [Abstract][Full Text] [Related]
9. Genome Wide Transcriptome Analysis Reveals Complex Regulatory Mechanisms Underlying Phosphate Homeostasis in Soybean Nodules.
Xue Y; Zhuang Q; Zhu S; Xiao B; Liang C; Liao H; Tian J
Int J Mol Sci; 2018 Sep; 19(10):. PubMed ID: 30261621
[TBL] [Abstract][Full Text] [Related]
10. Next-generation sequencing facilitates quantitative analysis of wild-type and Nrl(-/-) retinal transcriptomes.
Brooks MJ; Rajasimha HK; Roger JE; Swaroop A
Mol Vis; 2011; 17():3034-54. PubMed ID: 22162623
[TBL] [Abstract][Full Text] [Related]
11. GmEXPB2, a Cell Wall β-Expansin, Affects Soybean Nodulation through Modifying Root Architecture and Promoting Nodule Formation and Development.
Li X; Zhao J; Tan Z; Zeng R; Liao H
Plant Physiol; 2015 Dec; 169(4):2640-53. PubMed ID: 26432877
[TBL] [Abstract][Full Text] [Related]
12. Coupled Transcriptomics for Differential Expression Analysis and Determination of Transcription Start Sites: Design and Bioinformatics.
Rodríguez-García A; Sola-Landa A; Pérez-Redondo R
Methods Mol Biol; 2021; 2296():263-278. PubMed ID: 33977454
[TBL] [Abstract][Full Text] [Related]
13. A Comparison of transgenic and wild type soybean seeds: analysis of transcriptome profiles using RNA-Seq.
Lambirth KC; Whaley AM; Blakley IC; Schlueter JA; Bost KL; Loraine AE; Piller KJ
BMC Biotechnol; 2015 Oct; 15():89. PubMed ID: 26427366
[TBL] [Abstract][Full Text] [Related]
14. Genome-wide transcriptome analysis of soybean primary root under varying water-deficit conditions.
Song L; Prince S; Valliyodan B; Joshi T; Maldonado dos Santos JV; Wang J; Lin L; Wan J; Wang Y; Xu D; Nguyen HT
BMC Genomics; 2016 Jan; 17():57. PubMed ID: 26769043
[TBL] [Abstract][Full Text] [Related]
15. Comparative RNA-Seq Analysis Reveals That Regulatory Network of Maize Root Development Controls the Expression of Genes in Response to N Stress.
He X; Ma H; Zhao X; Nie S; Li Y; Zhang Z; Shen Y; Chen Q; Lu Y; Lan H; Zhou S; Gao S; Pan G; Lin H
PLoS One; 2016; 11(3):e0151697. PubMed ID: 26990640
[TBL] [Abstract][Full Text] [Related]
16. Large-scale analysis of putative soybean regulatory gene expression identifies a Myb gene involved in soybean nodule development.
Libault M; Joshi T; Takahashi K; Hurley-Sommer A; Puricelli K; Blake S; Finger RE; Taylor CG; Xu D; Nguyen HT; Stacey G
Plant Physiol; 2009 Nov; 151(3):1207-20. PubMed ID: 19755542
[TBL] [Abstract][Full Text] [Related]
17. Transcriptional Regulatory Network of GA Floral Induction Pathway in LA Hybrid Lily.
Li W; Yong Y; Zhang Y; Lyu Y
Int J Mol Sci; 2019 May; 20(11):. PubMed ID: 31159293
[TBL] [Abstract][Full Text] [Related]
18. Data Analysis in Single-Cell Transcriptome Sequencing.
Gao S
Methods Mol Biol; 2018; 1754():311-326. PubMed ID: 29536451
[TBL] [Abstract][Full Text] [Related]
19. Analysis of Whole Transcriptome RNA-seq Data Reveals Many Alternative Splicing Events in Soybean Roots under Drought Stress Conditions.
Song L; Pan Z; Chen L; Dai Y; Wan J; Ye H; Nguyen HT; Zhang G; Chen H
Genes (Basel); 2020 Dec; 11(12):. PubMed ID: 33352659
[TBL] [Abstract][Full Text] [Related]
20. Analysis of Spatio-Temporal Transcriptome Profiles of Soybean (
Sun S; Yi C; Ma J; Wang S; Peirats-Llobet M; Lewsey MG; Whelan J; Shou H
Int J Mol Sci; 2020 Oct; 21(20):. PubMed ID: 33066688
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]