These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

218 related articles for article (PubMed ID: 24068035)

  • 21. miRseqViewer: multi-panel visualization of sequence, structure and expression for analysis of microRNA sequencing data.
    Jang I; Chang H; Jun Y; Park S; Yang JO; Lee B; Kim W; Kim VN; Lee S
    Bioinformatics; 2015 Feb; 31(4):596-8. PubMed ID: 25322835
    [TBL] [Abstract][Full Text] [Related]  

  • 22. CMap3D: a 3D visualization tool for comparative genetic maps.
    Duran C; Boskovic Z; Imelfort M; Batley J; Hamilton NA; Edwards D
    Bioinformatics; 2010 Jan; 26(2):273-4. PubMed ID: 19942584
    [TBL] [Abstract][Full Text] [Related]  

  • 23. GMHCC: high-throughput analysis of biomolecular data using graph-based multiple hierarchical consensus clustering.
    Lu Y; Yu Z; Wang Y; Ma Z; Wong KC; Li X
    Bioinformatics; 2022 May; 38(11):3020-3028. PubMed ID: 35451457
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Sockeye: a 3D environment for comparative genomics.
    Montgomery SB; Astakhova T; Bilenky M; Birney E; Fu T; Hassel M; Melsopp C; Rak M; Robertson AG; Sleumer M; Siddiqui AS; Jones SJ
    Genome Res; 2004 May; 14(5):956-62. PubMed ID: 15123592
    [TBL] [Abstract][Full Text] [Related]  

  • 25. PHOG-BLAST--a new generation tool for fast similarity search of protein families.
    Merkeev IV; Mironov AA
    BMC Evol Biol; 2006 Jun; 6():51. PubMed ID: 16792802
    [TBL] [Abstract][Full Text] [Related]  

  • 26. panX: pan-genome analysis and exploration.
    Ding W; Baumdicker F; Neher RA
    Nucleic Acids Res; 2018 Jan; 46(1):e5. PubMed ID: 29077859
    [TBL] [Abstract][Full Text] [Related]  

  • 27. halSynteny: a fast, easy-to-use conserved synteny block construction method for multiple whole-genome alignments.
    Krasheninnikova K; Diekhans M; Armstrong J; Dievskii A; Paten B; O'Brien S
    Gigascience; 2020 Jun; 9(6):. PubMed ID: 32463100
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Mulan: multiple-sequence local alignment and visualization for studying function and evolution.
    Ovcharenko I; Loots GG; Giardine BM; Hou M; Ma J; Hardison RC; Stubbs L; Miller W
    Genome Res; 2005 Jan; 15(1):184-94. PubMed ID: 15590941
    [TBL] [Abstract][Full Text] [Related]  

  • 29. CiVi: circular genome visualization with unique features to analyze sequence elements.
    Overmars L; van Hijum SA; Siezen RJ; Francke C
    Bioinformatics; 2015 Sep; 31(17):2867-9. PubMed ID: 25910699
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Challenges in gene-oriented approaches for pangenome content discovery.
    Bonnici V; Maresi E; Giugno R
    Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32893299
    [TBL] [Abstract][Full Text] [Related]  

  • 31. SwiftOrtho: A fast, memory-efficient, multiple genome orthology classifier.
    Hu X; Friedberg I
    Gigascience; 2019 Oct; 8(10):. PubMed ID: 31648300
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Search and clustering orders of magnitude faster than BLAST.
    Edgar RC
    Bioinformatics; 2010 Oct; 26(19):2460-1. PubMed ID: 20709691
    [TBL] [Abstract][Full Text] [Related]  

  • 33. H-BLAST: a fast protein sequence alignment toolkit on heterogeneous computers with GPUs.
    Ye W; Chen Y; Zhang Y; Xu Y
    Bioinformatics; 2017 Apr; 33(8):1130-1138. PubMed ID: 28087515
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Quadratic regression analysis for gene discovery and pattern recognition for non-cyclic short time-course microarray experiments.
    Liu H; Tarima S; Borders AS; Getchell TV; Getchell ML; Stromberg AJ
    BMC Bioinformatics; 2005 Apr; 6():106. PubMed ID: 15850479
    [TBL] [Abstract][Full Text] [Related]  

  • 35. PentaPlot: a software tool for the illustration of genome mosaicism.
    Hamel L; Zhaxybayeva O; Gogarten JP
    BMC Bioinformatics; 2005 Jun; 6():139. PubMed ID: 15938752
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Massively Parallel Implementation of Sequence Alignment with Basic Local Alignment Search Tool Using Parallel Computing in Java Library.
    Nowicki M; Bzhalava D; BaŁa P
    J Comput Biol; 2018 Aug; 25(8):871-881. PubMed ID: 30004240
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Cactus graphs for genome comparisons.
    Paten B; Diekhans M; Earl D; John JS; Ma J; Suh B; Haussler D
    J Comput Biol; 2011 Mar; 18(3):469-81. PubMed ID: 21385048
    [TBL] [Abstract][Full Text] [Related]  

  • 38. ProClust: improved clustering of protein sequences with an extended graph-based approach.
    Pipenbacher P; Schliep A; Schneckener S; Schönhuth A; Schomburg D; Schrader R
    Bioinformatics; 2002; 18 Suppl 2():S182-91. PubMed ID: 12386002
    [TBL] [Abstract][Full Text] [Related]  

  • 39. MultiMSOAR 2.0: an accurate tool to identify ortholog groups among multiple genomes.
    Shi G; Peng MC; Jiang T
    PLoS One; 2011; 6(6):e20892. PubMed ID: 21712981
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Pangenome Graphs.
    Eizenga JM; Novak AM; Sibbesen JA; Heumos S; Ghaffaari A; Hickey G; Chang X; Seaman JD; Rounthwaite R; Ebler J; Rautiainen M; Garg S; Paten B; Marschall T; Sirén J; Garrison E
    Annu Rev Genomics Hum Genet; 2020 Aug; 21():139-162. PubMed ID: 32453966
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.