BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

222 related articles for article (PubMed ID: 24071583)

  • 1. Long insert whole genome sequencing for copy number variant and translocation detection.
    Liang WS; Aldrich J; Tembe W; Kurdoglu A; Cherni I; Phillips L; Reiman R; Baker A; Weiss GJ; Carpten JD; Craig DW
    Nucleic Acids Res; 2014 Jan; 42(2):e8. PubMed ID: 24071583
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Whole Genome Library Construction for Next Generation Sequencing.
    Keats JJ; Cuyugan L; Adkins J; Liang WS
    Methods Mol Biol; 2018; 1706():151-161. PubMed ID: 29423797
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Performance characterization of PCR-free whole genome sequencing for clinical diagnosis.
    Zhou G; Zhou M; Zeng F; Zhang N; Sun Y; Qiao Z; Guo X; Zhou S; Yun G; Xie J; Wang X; Liu F; Fan C; Wang Y; Fang Z; Tian Z; Dai W; Sun J; Peng Z; Song L
    Medicine (Baltimore); 2022 Mar; 101(10):e28972. PubMed ID: 35451387
    [TBL] [Abstract][Full Text] [Related]  

  • 4. New library construction method for single-cell genomes.
    Xi L; Belyaev A; Spurgeon S; Wang X; Gong H; Aboukhalil R; Fekete R
    PLoS One; 2017; 12(7):e0181163. PubMed ID: 28723968
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DNA copy number analysis of fresh and formalin-fixed specimens by shallow whole-genome sequencing with identification and exclusion of problematic regions in the genome assembly.
    Scheinin I; Sie D; Bengtsson H; van de Wiel MA; Olshen AB; van Thuijl HF; van Essen HF; Eijk PP; Rustenburg F; Meijer GA; Reijneveld JC; Wesseling P; Pinkel D; Albertson DG; Ylstra B
    Genome Res; 2014 Dec; 24(12):2022-32. PubMed ID: 25236618
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cancer whole-genome sequencing: present and future.
    Nakagawa H; Wardell CP; Furuta M; Taniguchi H; Fujimoto A
    Oncogene; 2015 Dec; 34(49):5943-50. PubMed ID: 25823020
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Copy number analysis by low coverage whole genome sequencing using ultra low-input DNA from formalin-fixed paraffin embedded tumor tissue.
    Kader T; Goode DL; Wong SQ; Connaughton J; Rowley SM; Devereux L; Byrne D; Fox SB; Mir Arnau G; Tothill RW; Campbell IG; Gorringe KL
    Genome Med; 2016 Nov; 8(1):121. PubMed ID: 27846907
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Next Generation Sequencing of Prenatal Structural Chromosomal Rearrangements Using Large-Insert Libraries.
    Currall BB; Antolik CW; Collins RL; Talkowski ME
    Methods Mol Biol; 2019; 1885():251-265. PubMed ID: 30506203
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Whole-genome sequencing analysis of CNV using low-coverage and paired-end strategies is efficient and outperforms array-based CNV analysis.
    Zhou B; Ho SS; Zhang X; Pattni R; Haraksingh RR; Urban AE
    J Med Genet; 2018 Nov; 55(11):735-743. PubMed ID: 30061371
    [TBL] [Abstract][Full Text] [Related]  

  • 10. SAAS-CNV: A Joint Segmentation Approach on Aggregated and Allele Specific Signals for the Identification of Somatic Copy Number Alterations with Next-Generation Sequencing Data.
    Zhang Z; Hao K
    PLoS Comput Biol; 2015 Nov; 11(11):e1004618. PubMed ID: 26583378
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Characterization of Somatically-Acquired Copy Number Alterations in Chronic Lymphocytic Leukaemia Using Shallow Whole Genome Sequencing.
    Parker H; Carr L; Syeda S; Bryant D; Strefford JC
    Methods Mol Biol; 2019; 1881():327-353. PubMed ID: 30350215
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Copy number alterations detected by whole-exome and whole-genome sequencing of esophageal adenocarcinoma.
    Wang X; Li X; Cheng Y; Sun X; Sun X; Self S; Kooperberg C; Dai JY
    Hum Genomics; 2015 Sep; 9(1):22. PubMed ID: 26374103
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Computational methods for detecting copy number variations in cancer genome using next generation sequencing: principles and challenges.
    Liu B; Morrison CD; Johnson CS; Trump DL; Qin M; Conroy JC; Wang J; Liu S
    Oncotarget; 2013 Nov; 4(11):1868-81. PubMed ID: 24240121
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Precise detection of chromosomal translocation or inversion breakpoints by whole-genome sequencing.
    Suzuki T; Tsurusaki Y; Nakashima M; Miyake N; Saitsu H; Takeda S; Matsumoto N
    J Hum Genet; 2014 Dec; 59(12):649-54. PubMed ID: 25296578
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Genomic analysis of Korean patients with advanced prostate cancer by use of a comprehensive next-generation sequencing panel and low-coverage, whole-genome sequencing.
    Kang M; Cho E; Jang J; Lee J; Jeon Y; Jeong BC; Seo SI; Jeon SS; Lee HM; Choi HY; Jeon HG
    Investig Clin Urol; 2019 Jul; 60(4):227-234. PubMed ID: 31294131
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Accurity: accurate tumor purity and ploidy inference from tumor-normal WGS data by jointly modelling somatic copy number alterations and heterozygous germline single-nucleotide-variants.
    Luo Z; Fan X; Su Y; Huang YS
    Bioinformatics; 2018 Jun; 34(12):2004-2011. PubMed ID: 29385401
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Application of Restriction Site-Associated DNA Sequencing (RAD-Seq) for Copy Number Variation and Triploidy Detection in Human.
    He JC; Li SY; He WZ; Xian JJ; Ma XY; Wang YC; Zhang MC; Ye GX; Liang B; Xia Q; Li Q
    Cytogenet Genome Res; 2021; 161(8-9):406-413. PubMed ID: 34657031
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Identifying gene disruptions in novel balanced de novo constitutional translocations in childhood cancer patients by whole-genome sequencing.
    Ritter DI; Haines K; Cheung H; Davis CF; Lau CC; Berg JS; Brown CW; Thompson PA; Gibbs R; Wheeler DA; Plon SE
    Genet Med; 2015 Oct; 17(10):831-5. PubMed ID: 25569436
    [TBL] [Abstract][Full Text] [Related]  

  • 19. 1D Genome Sequencing on the Oxford Nanopore MinION.
    Goodwin S; Wappel R; McCombie WR
    Curr Protoc Hum Genet; 2017 Jul; 94():18.11.1-18.11.14. PubMed ID: 28696556
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Allele-specific copy-number discovery from whole-genome and whole-exome sequencing.
    Wang W; Wang W; Sun W; Crowley JJ; Szatkiewicz JP
    Nucleic Acids Res; 2015 Aug; 43(14):e90. PubMed ID: 25883151
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.