These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

195 related articles for article (PubMed ID: 24081429)

  • 1. Changes in translational efficiency is a dominant regulatory mechanism in the environmental response of bacteria.
    Taylor RC; Webb Robertson BJ; Markillie LM; Serres MH; Linggi BE; Aldrich JT; Hill EA; Romine MF; Lipton MS; Wiley HS
    Integr Biol (Camb); 2013 Nov; 5(11):1393-406. PubMed ID: 24081429
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Regulation of Gene Expression in Shewanella oneidensis MR-1 during Electron Acceptor Limitation and Bacterial Nanowire Formation.
    Barchinger SE; Pirbadian S; Sambles C; Baker CS; Leung KM; Burroughs NJ; El-Naggar MY; Golbeck JH
    Appl Environ Microbiol; 2016 Sep; 82(17):5428-43. PubMed ID: 27342561
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Codon usage of highly expressed genes affects proteome-wide translation efficiency.
    Frumkin I; Lajoie MJ; Gregg CJ; Hornung G; Church GM; Pilpel Y
    Proc Natl Acad Sci U S A; 2018 May; 115(21):E4940-E4949. PubMed ID: 29735666
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparative temporal proteomics of a response regulator (SO2426)-deficient strain and wild-type Shewanella oneidensis MR-1 during chromate transformation.
    Chourey K; Thompson MR; Shah M; Zhang B; Verberkmoes NC; Thompson DK; Hettich RL
    J Proteome Res; 2009 Jan; 8(1):59-71. PubMed ID: 19118451
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Dynamic changes in translational efficiency are deduced from codon usage of the transcriptome.
    Gingold H; Dahan O; Pilpel Y
    Nucleic Acids Res; 2012 Nov; 40(20):10053-63. PubMed ID: 22941644
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Transcriptional and proteomic analysis of a ferric uptake regulator (fur) mutant of Shewanella oneidensis: possible involvement of fur in energy metabolism, transcriptional regulation, and oxidative stress.
    Thompson DK; Beliaev AS; Giometti CS; Tollaksen SL; Khare T; Lies DP; Nealson KH; Lim H; Yates J; Brandt CC; Tiedje JM; Zhou J
    Appl Environ Microbiol; 2002 Feb; 68(2):881-92. PubMed ID: 11823232
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Molecular dynamics of the Shewanella oneidensis response to chromate stress.
    Brown SD; Thompson MR; Verberkmoes NC; Chourey K; Shah M; Zhou J; Hettich RL; Thompson DK
    Mol Cell Proteomics; 2006 Jun; 5(6):1054-71. PubMed ID: 16524964
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Correlation of mRNA expression and protein abundance affected by multiple sequence features related to translational efficiency in Desulfovibrio vulgaris: a quantitative analysis.
    Nie L; Wu G; Zhang W
    Genetics; 2006 Dec; 174(4):2229-43. PubMed ID: 17028312
    [TBL] [Abstract][Full Text] [Related]  

  • 9. tRNA-mediated codon-biased translation in mycobacterial hypoxic persistence.
    Chionh YH; McBee M; Babu IR; Hia F; Lin W; Zhao W; Cao J; Dziergowska A; Malkiewicz A; Begley TJ; Alonso S; Dedon PC
    Nat Commun; 2016 Nov; 7():13302. PubMed ID: 27834374
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis.
    Wan XF; Verberkmoes NC; McCue LA; Stanek D; Connelly H; Hauser LJ; Wu L; Liu X; Yan T; Leaphart A; Hettich RL; Zhou J; Thompson DK
    J Bacteriol; 2004 Dec; 186(24):8385-400. PubMed ID: 15576789
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Transcriptome analysis reveals response regulator SO2426-mediated gene expression in Shewanella oneidensis MR-1 under chromate challenge.
    Chourey K; Wei W; Wan XF; Thompson DK
    BMC Genomics; 2008 Aug; 9():395. PubMed ID: 18718017
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Transcriptome analysis of Shewanella oneidensis MR-1 in response to elevated salt conditions.
    Liu Y; Gao W; Wang Y; Wu L; Liu X; Yan T; Alm E; Arkin A; Thompson DK; Fields MW; Zhou J
    J Bacteriol; 2005 Apr; 187(7):2501-7. PubMed ID: 15774893
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Microarray transcription profiling of a Shewanella oneidensis etrA mutant.
    Beliaev AS; Thompson DK; Fields MW; Wu L; Lies DP; Nealson KH; Zhou J
    J Bacteriol; 2002 Aug; 184(16):4612-6. PubMed ID: 12142431
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Transcriptome analysis reveals a stress response of Shewanella oneidensis deprived of background levels of ionizing radiation.
    Castillo H; Li X; Schilkey F; Smith GB
    PLoS One; 2018; 13(5):e0196472. PubMed ID: 29768440
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Differential label-free quantitative proteomic analysis of Shewanella oneidensis cultured under aerobic and suboxic conditions by accurate mass and time tag approach.
    Fang R; Elias DA; Monroe ME; Shen Y; McIntosh M; Wang P; Goddard CD; Callister SJ; Moore RJ; Gorby YA; Adkins JN; Fredrickson JK; Lipton MS; Smith RD
    Mol Cell Proteomics; 2006 Apr; 5(4):714-25. PubMed ID: 16401633
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Cellular response of Shewanella oneidensis to strontium stress.
    Brown SD; Martin M; Deshpande S; Seal S; Huang K; Alm E; Yang Y; Wu L; Yan T; Liu X; Arkin A; Chourey K; Zhou J; Thompson DK
    Appl Environ Microbiol; 2006 Jan; 72(1):890-900. PubMed ID: 16391131
    [TBL] [Abstract][Full Text] [Related]  

  • 17. CRISPRi-sRNA: Transcriptional-Translational Regulation of Extracellular Electron Transfer in Shewanella oneidensis.
    Cao Y; Li X; Li F; Song H
    ACS Synth Biol; 2017 Sep; 6(9):1679-1690. PubMed ID: 28616968
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Comparative genomic reconstruction of transcriptional networks controlling central metabolism in the Shewanella genus.
    Rodionov DA; Novichkov PS; Stavrovskaya ED; Rodionova IA; Li X; Kazanov MD; Ravcheev DA; Gerasimova AV; Kazakov AE; Kovaleva GY; Permina EA; Laikova ON; Overbeek R; Romine MF; Fredrickson JK; Arkin AP; Dubchak I; Osterman AL; Gelfand MS
    BMC Genomics; 2011 Jun; 12 Suppl 1(Suppl 1):S3. PubMed ID: 21810205
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Translational sensitivity of the Escherichia coli genome to fluctuating tRNA availability.
    Wohlgemuth SE; Gorochowski TE; Roubos JA
    Nucleic Acids Res; 2013 Sep; 41(17):8021-33. PubMed ID: 23842674
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The ribosome in action: Tuning of translational efficiency and protein folding.
    Rodnina MV
    Protein Sci; 2016 Aug; 25(8):1390-406. PubMed ID: 27198711
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.