These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

431 related articles for article (PubMed ID: 24084808)

  • 1. Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction.
    O'Brien EJ; Lerman JA; Chang RL; Hyduke DR; Palsson BØ
    Mol Syst Biol; 2013 Oct; 9():693. PubMed ID: 24084808
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Reconstruction and modeling protein translocation and compartmentalization in Escherichia coli at the genome-scale.
    Liu JK; O'Brien EJ; Lerman JA; Zengler K; Palsson BO; Feist AM
    BMC Syst Biol; 2014 Sep; 8():110. PubMed ID: 25227965
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Principles of proteome allocation are revealed using proteomic data and genome-scale models.
    Yang L; Yurkovich JT; Lloyd CJ; Ebrahim A; Saunders MA; Palsson BO
    Sci Rep; 2016 Nov; 6():36734. PubMed ID: 27857205
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods.
    Lewis NE; Nagarajan H; Palsson BO
    Nat Rev Microbiol; 2012 Feb; 10(4):291-305. PubMed ID: 22367118
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Basic and applied uses of genome-scale metabolic network reconstructions of Escherichia coli.
    McCloskey D; Palsson BØ; Feist AM
    Mol Syst Biol; 2013; 9():661. PubMed ID: 23632383
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Emergence of diauxie as an optimal growth strategy under resource allocation constraints in cellular metabolism.
    Salvy P; Hatzimanikatis V
    Proc Natl Acad Sci U S A; 2021 Feb; 118(8):. PubMed ID: 33602812
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome-scale metabolic modelling when changes in environmental conditions affect biomass composition.
    Schulz C; Kumelj T; Karlsen E; Almaas E
    PLoS Comput Biol; 2021 May; 17(5):e1008528. PubMed ID: 34029317
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Reconstructing organisms in silico: genome-scale models and their emerging applications.
    Fang X; Lloyd CJ; Palsson BO
    Nat Rev Microbiol; 2020 Dec; 18(12):731-743. PubMed ID: 32958892
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Transcriptional regulation in constraints-based metabolic models of Escherichia coli.
    Covert MW; Palsson BØ
    J Biol Chem; 2002 Aug; 277(31):28058-64. PubMed ID: 12006566
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Integrating thermodynamic and enzymatic constraints into genome-scale metabolic models.
    Yang X; Mao Z; Zhao X; Wang R; Zhang P; Cai J; Xue C; Ma H
    Metab Eng; 2021 Sep; 67():133-144. PubMed ID: 34174426
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Development of a Genome-Scale Metabolic Model and Phenome Analysis of the Probiotic
    Kim D; Kim Y; Yoon SH
    Int J Mol Sci; 2021 Feb; 22(4):. PubMed ID: 33672760
    [No Abstract]   [Full Text] [Related]  

  • 12. Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns.
    Kaleta C; de Figueiredo LF; Schuster S
    Genome Res; 2009 Oct; 19(10):1872-83. PubMed ID: 19541909
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structural systems biology evaluation of metabolic thermotolerance in Escherichia coli.
    Chang RL; Andrews K; Kim D; Li Z; Godzik A; Palsson BO
    Science; 2013 Jun; 340(6137):1220-3. PubMed ID: 23744946
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A system-wide network reconstruction of gene regulation and metabolism in Escherichia coli.
    Grimbs A; Klosik DF; Bornholdt S; Hütt MT
    PLoS Comput Biol; 2019 May; 15(5):e1006962. PubMed ID: 31050661
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Prediction of metabolic fluxes by incorporating genomic context and flux-converging pattern analyses.
    Park JM; Kim TY; Lee SY
    Proc Natl Acad Sci U S A; 2010 Aug; 107(33):14931-6. PubMed ID: 20679215
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Environmental versatility promotes modularity in genome-scale metabolic networks.
    Samal A; Wagner A; Martin OC
    BMC Syst Biol; 2011 Aug; 5():135. PubMed ID: 21864340
    [TBL] [Abstract][Full Text] [Related]  

  • 17. TRFBA: an algorithm to integrate genome-scale metabolic and transcriptional regulatory networks with incorporation of expression data.
    Motamedian E; Mohammadi M; Shojaosadati SA; Heydari M
    Bioinformatics; 2017 Apr; 33(7):1057-1063. PubMed ID: 28065897
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Metabolism gets lucky.
    Cooper TF
    Mol Syst Biol; 2010 Nov; 6():439. PubMed ID: 21119633
    [No Abstract]   [Full Text] [Related]  

  • 19. Mapping the landscape of metabolic goals of a cell.
    Zhao Q; Stettner AI; Reznik E; Paschalidis ICh; Segrè D
    Genome Biol; 2016 May; 17(1):109. PubMed ID: 27215445
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Laboratory evolution reveals a two-dimensional rate-yield tradeoff in microbial metabolism.
    Cheng C; O'Brien EJ; McCloskey D; Utrilla J; Olson C; LaCroix RA; Sandberg TE; Feist AM; Palsson BO; King ZA
    PLoS Comput Biol; 2019 Jun; 15(6):e1007066. PubMed ID: 31158228
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 22.