446 related articles for article (PubMed ID: 24131054)
1. Exact solutions for species tree inference from discordant gene trees.
Chang WC; Górecki P; Eulenstein O
J Bioinform Comput Biol; 2013 Oct; 11(5):1342005. PubMed ID: 24131054
[TBL] [Abstract][Full Text] [Related]
2. Exact median-tree inference for unrooted reconciliation costs.
Górecki P; Markin A; Eulenstein O
BMC Evol Biol; 2020 Oct; 20(Suppl 1):136. PubMed ID: 33115401
[TBL] [Abstract][Full Text] [Related]
3. Synthesizing large-scale species trees using the strict consensus approach.
Moon J; Eulenstein O
J Bioinform Comput Biol; 2017 Jun; 15(3):1740002. PubMed ID: 28513253
[TBL] [Abstract][Full Text] [Related]
4. Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models.
Chauve C; Ponty Y; Wallner M
J Math Biol; 2020 Apr; 80(5):1353-1388. PubMed ID: 32060618
[TBL] [Abstract][Full Text] [Related]
5. Efficient algorithms for knowledge-enhanced supertree and supermatrix phylogenetic problems.
Wehe A; Burleigh JG; Eulenstein O
IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(6):1432-41. PubMed ID: 24407302
[TBL] [Abstract][Full Text] [Related]
6. Consensus of All Solutions for Intractable Phylogenetic Tree Inference.
Tabaszewski P; Gorecki P; Markin A; Anderson T; Eulenstein O
IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(1):149-161. PubMed ID: 31613775
[TBL] [Abstract][Full Text] [Related]
7. Inferring optimal species trees under gene duplication and loss.
Bayzid MS; Mirarab S; Warnow T
Pac Symp Biocomput; 2013; ():250-61. PubMed ID: 23424130
[TBL] [Abstract][Full Text] [Related]
8. Species tree inference by minimizing deep coalescences.
Than C; Nakhleh L
PLoS Comput Biol; 2009 Sep; 5(9):e1000501. PubMed ID: 19749978
[TBL] [Abstract][Full Text] [Related]
9. Assessing approaches for inferring species trees from multi-copy genes.
Chaudhary R; Boussau B; Burleigh JG; Fernández-Baca D
Syst Biol; 2015 Mar; 64(2):325-39. PubMed ID: 25540456
[TBL] [Abstract][Full Text] [Related]
10. Triplet supertree heuristics for the tree of life.
Lin HT; Burleigh JG; Eulenstein O
BMC Bioinformatics; 2009 Jan; 10 Suppl 1(Suppl 1):S8. PubMed ID: 19208181
[TBL] [Abstract][Full Text] [Related]
11. Minimizing the deep coalescence cost.
Dąbkowski D; Tabaszewski P; Górecki P
J Bioinform Comput Biol; 2018 Oct; 16(5):1840021. PubMed ID: 30419782
[TBL] [Abstract][Full Text] [Related]
12. Efficient Local Search for Euclidean Path-Difference Median Trees.
Markin A; Eulenstein O
IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1374-1385. PubMed ID: 29035224
[TBL] [Abstract][Full Text] [Related]
13. An ILP solution for the gene duplication problem.
Chang WC; Burleigh GJ; Fernández-Baca DF; Eulenstein O
BMC Bioinformatics; 2011 Feb; 12 Suppl 1(Suppl 1):S14. PubMed ID: 21342543
[TBL] [Abstract][Full Text] [Related]
14. Reconstructing a SuperGeneTree minimizing reconciliation.
Lafond M; Ouangraoua A; El-Mabrouk N
BMC Bioinformatics; 2015; 16 Suppl 14(Suppl 14):S4. PubMed ID: 26451911
[TBL] [Abstract][Full Text] [Related]
15. Estimating optimal species trees from incomplete gene trees under deep coalescence.
Bayzid MS; Warnow T
J Comput Biol; 2012 Jun; 19(6):591-605. PubMed ID: 22697236
[TBL] [Abstract][Full Text] [Related]
16. Inferring duplication episodes from unrooted gene trees.
Paszek J; Górecki P
BMC Genomics; 2018 May; 19(Suppl 5):288. PubMed ID: 29745844
[TBL] [Abstract][Full Text] [Related]
17. Branch-and-bound approach for parsimonious inference of a species tree from a set of gene family trees.
Doyon JP; Chauve C
Adv Exp Med Biol; 2011; 696():287-95. PubMed ID: 21431569
[TBL] [Abstract][Full Text] [Related]
18. What is the danger of the anomaly zone for empirical phylogenetics?
Huang H; Knowles LL
Syst Biol; 2009 Oct; 58(5):527-36. PubMed ID: 20525606
[TBL] [Abstract][Full Text] [Related]
19. Gene family evolution by duplication, speciation, and loss.
Chauve C; Doyon JP; El-Mabrouk N
J Comput Biol; 2008 Oct; 15(8):1043-62. PubMed ID: 18781833
[TBL] [Abstract][Full Text] [Related]
20. The gene-duplication problem: near-linear time algorithms for NNI-based local searches.
Bansal MS; Eulenstein O; Wehe A
IEEE/ACM Trans Comput Biol Bioinform; 2009; 6(2):221-31. PubMed ID: 19407347
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
