These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

138 related articles for article (PubMed ID: 24137668)

  • 21. Acceleration of coarse grain molecular dynamics on GPU architectures.
    Shkurti A; Orsi M; Macii E; Ficarra E; Acquaviva A
    J Comput Chem; 2013 Apr; 34(10):803-18. PubMed ID: 23280763
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Hybrid approach combining dissipative particle dynamics and finite-difference diffusion model: simulation of reactive polymer coupling and interfacial polymerization.
    Berezkin AV; Kudryavtsev YV
    J Chem Phys; 2013 Oct; 139(15):154102. PubMed ID: 24160495
    [TBL] [Abstract][Full Text] [Related]  

  • 23. GENESIS 1.1: A hybrid-parallel molecular dynamics simulator with enhanced sampling algorithms on multiple computational platforms.
    Kobayashi C; Jung J; Matsunaga Y; Mori T; Ando T; Tamura K; Kamiya M; Sugita Y
    J Comput Chem; 2017 Sep; 38(25):2193-2206. PubMed ID: 28718930
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Multiscale simulations of anisotropic particles combining molecular dynamics and Green's function reaction dynamics.
    Vijaykumar A; Ouldridge TE; Ten Wolde PR; Bolhuis PG
    J Chem Phys; 2017 Mar; 146(11):114106. PubMed ID: 28330367
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Micellization Studied by GPU-Accelerated Coarse-Grained Molecular Dynamics.
    Levine BG; LeBard DN; DeVane R; Shinoda W; Kohlmeyer A; Klein ML
    J Chem Theory Comput; 2011 Dec; 7(12):4135-45. PubMed ID: 26598358
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Accelerating molecular modeling applications with graphics processors.
    Stone JE; Phillips JC; Freddolino PL; Hardy DJ; Trabuco LG; Schulten K
    J Comput Chem; 2007 Dec; 28(16):2618-40. PubMed ID: 17894371
    [TBL] [Abstract][Full Text] [Related]  

  • 27. GPU-accelerated approximate kernel method for quantum machine learning.
    Browning NJ; Faber FA; Anatole von Lilienfeld O
    J Chem Phys; 2022 Dec; 157(21):214801. PubMed ID: 36511559
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Multi-GPU implementation of a VMAT treatment plan optimization algorithm.
    Tian Z; Peng F; Folkerts M; Tan J; Jia X; Jiang SB
    Med Phys; 2015 Jun; 42(6):2841-52. PubMed ID: 26127037
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Molecular Dynamics Simulations Accelerated by GPU for Biological Macromolecules with a Non-Ewald Scheme for Electrostatic Interactions.
    Mashimo T; Fukunishi Y; Kamiya N; Takano Y; Fukuda I; Nakamura H
    J Chem Theory Comput; 2013 Dec; 9(12):5599-609. PubMed ID: 26592294
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Computation of induced dipoles in molecular mechanics simulations using graphics processors.
    Pratas F; Sousa L; Dieterich JM; Mata RA
    J Chem Inf Model; 2012 May; 52(5):1159-66. PubMed ID: 22536925
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Boosting Free-Energy Perturbation Calculations with GPU-Accelerated NAMD.
    Chen H; Maia JDC; Radak BK; Hardy DJ; Cai W; Chipot C; Tajkhorshid E
    J Chem Inf Model; 2020 Nov; 60(11):5301-5307. PubMed ID: 32805108
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Heterogeneous computing for epidemiological model fitting and simulation.
    Kovac T; Haber T; Reeth FV; Hens N
    BMC Bioinformatics; 2018 Mar; 19(1):101. PubMed ID: 29548279
    [TBL] [Abstract][Full Text] [Related]  

  • 33. ddcMD: A fully GPU-accelerated molecular dynamics program for the Martini force field.
    Zhang X; Sundram S; Oppelstrup T; Kokkila-Schumacher SIL; Carpenter TS; Ingólfsson HI; Streitz FH; Lightstone FC; Glosli JN
    J Chem Phys; 2020 Jul; 153(4):045103. PubMed ID: 32752727
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The CUMULUS coarse graining method: transferable potentials for water and solutes.
    van Hoof B; Markvoort AJ; van Santen RA; Hilbers PA
    J Phys Chem B; 2011 Aug; 115(33):10001-12. PubMed ID: 21740053
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Lipid and Peptide Diffusion in Bilayers: The Saffman-Delbrück Model and Periodic Boundary Conditions.
    Venable RM; Ingólfsson HI; Lerner MG; Perrin BS; Camley BA; Marrink SJ; Brown FLH; Pastor RW
    J Phys Chem B; 2017 Apr; 121(15):3443-3457. PubMed ID: 27966982
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Hybrid particle-field molecular dynamics simulation for polyelectrolyte systems.
    Zhu YL; Lu ZY; Milano G; Shi AC; Sun ZY
    Phys Chem Chem Phys; 2016 Apr; 18(14):9799-808. PubMed ID: 27001709
    [TBL] [Abstract][Full Text] [Related]  

  • 37. GPU-accelerated analysis and visualization of large structures solved by molecular dynamics flexible fitting.
    Stone JE; McGreevy R; Isralewitz B; Schulten K
    Faraday Discuss; 2014; 169():265-83. PubMed ID: 25340325
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Coarse-grained force fields for molecular simulations.
    Barnoud J; Monticelli L
    Methods Mol Biol; 2015; 1215():125-49. PubMed ID: 25330962
    [TBL] [Abstract][Full Text] [Related]  

  • 39. GPU-accelerated molecular mechanics computations.
    Anthopoulos A; Grimstead I; Brancale A
    J Comput Chem; 2013 Oct; 34(26):2249-60. PubMed ID: 23861143
    [TBL] [Abstract][Full Text] [Related]  

  • 40. DPPC-cholesterol phase diagram using coarse-grained Molecular Dynamics simulations.
    Wang Y; Gkeka P; Fuchs JE; Liedl KR; Cournia Z
    Biochim Biophys Acta; 2016 Nov; 1858(11):2846-2857. PubMed ID: 27526680
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.