These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
3. Cell ontology in an age of data-driven cell classification. Osumi-Sutherland D BMC Bioinformatics; 2017 Dec; 18(Suppl 17):558. PubMed ID: 29322914 [TBL] [Abstract][Full Text] [Related]
4. The AEO, an Ontology of Anatomical Entities for Classifying Animal Tissues and Organs. Bard JB Front Genet; 2012; 3():18. PubMed ID: 22347883 [TBL] [Abstract][Full Text] [Related]
5. Formal axioms in biomedical ontologies improve analysis and interpretation of associated data. Smaili FZ; Gao X; Hoehndorf R Bioinformatics; 2020 Apr; 36(7):2229-2236. PubMed ID: 31821406 [TBL] [Abstract][Full Text] [Related]
6. Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase. Segerdell E; Ponferrada VG; James-Zorn C; Burns KA; Fortriede JD; Dahdul WM; Vize PD; Zorn AM J Biomed Semantics; 2013 Oct; 4(1):31. PubMed ID: 24139024 [TBL] [Abstract][Full Text] [Related]
7. Ontology design patterns to disambiguate relations between genes and gene products in GENIA. Hoehndorf R; Ngonga Ngomo AC; Pyysalo S; Ohta T; Oellrich A; Rebholz-Schuhmann D J Biomed Semantics; 2011 Oct; 2 Suppl 5(Suppl 5):S1. PubMed ID: 22166341 [TBL] [Abstract][Full Text] [Related]
8. Automating generation of textual class definitions from OWL to English. Stevens R; Malone J; Williams S; Power R; Third A J Biomed Semantics; 2011 May; 2 Suppl 2(Suppl 2):S5. PubMed ID: 21624160 [TBL] [Abstract][Full Text] [Related]
10. OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction. Smaili FZ; Gao X; Hoehndorf R Bioinformatics; 2019 Jun; 35(12):2133-2140. PubMed ID: 30407490 [TBL] [Abstract][Full Text] [Related]
11. AISO: Annotation of Image Segments with Ontologies. Lingutla NT; Preece J; Todorovic S; Cooper L; Moore L; Jaiswal P J Biomed Semantics; 2014; 5(1):50. PubMed ID: 25584184 [TBL] [Abstract][Full Text] [Related]
12. Human Disease Ontology 2018 update: classification, content and workflow expansion. Schriml LM; Mitraka E; Munro J; Tauber B; Schor M; Nickle L; Felix V; Jeng L; Bearer C; Lichenstein R; Bisordi K; Campion N; Hyman B; Kurland D; Oates CP; Kibbey S; Sreekumar P; Le C; Giglio M; Greene C Nucleic Acids Res; 2019 Jan; 47(D1):D955-D962. PubMed ID: 30407550 [TBL] [Abstract][Full Text] [Related]
13. Discovering gene annotations in biomedical text databases. Cakmak A; Ozsoyoglu G BMC Bioinformatics; 2008 Mar; 9():143. PubMed ID: 18325104 [TBL] [Abstract][Full Text] [Related]
14. Formalizing biomedical concepts from textual definitions. Petrova A; Ma Y; Tsatsaronis G; Kissa M; Distel F; Baader F; Schroeder M J Biomed Semantics; 2015; 6():22. PubMed ID: 25949785 [TBL] [Abstract][Full Text] [Related]
15. Formalizing Invertebrate Morphological Data: A Descriptive Model for Cuticle-Based Skeleto-Muscular Systems, an Ontology for Insect Anatomy, and their Potential Applications in Biodiversity Research and Informatics. Girón JC; Tarasov S; González Montaña LA; Matentzoglu N; Smith AD; Koch M; Boudinot BE; Bouchard P; Burks R; Vogt L; Yoder M; Osumi-Sutherland D; Friedrich F; Beutel RG; Mikó I Syst Biol; 2023 Nov; 72(5):1084-1100. PubMed ID: 37094905 [TBL] [Abstract][Full Text] [Related]
16. Patient safety classifications, taxonomies and ontologies, part 2: A systematic review on content coverage. Taheri Moghadam S; Sheikhtaheri A; Hooman N J Biomed Inform; 2023 Dec; 148():104549. PubMed ID: 37984548 [TBL] [Abstract][Full Text] [Related]