BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

180 related articles for article (PubMed ID: 24145223)

  • 1. Using machine learning and high-throughput RNA sequencing to classify the precursors of small non-coding RNAs.
    Ryvkin P; Leung YY; Ungar LH; Gregory BD; Wang LS
    Methods; 2014 May; 67(1):28-35. PubMed ID: 24145223
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CoRAL: predicting non-coding RNAs from small RNA-sequencing data.
    Leung YY; Ryvkin P; Ungar LH; Gregory BD; Wang LS
    Nucleic Acids Res; 2013 Aug; 41(14):e137. PubMed ID: 23700308
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Identification and classification of small RNAs in transcriptome sequence data.
    Langenberger D; Bermudez-Santana CI; Stadler PF; Hoffmann S
    Pac Symp Biocomput; 2010; ():80-7. PubMed ID: 19908360
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The discovery potential of RNA processing profiles.
    Pagès A; Dotu I; Pallarès-Albanell J; Martí E; Guigó R; Eyras E
    Nucleic Acids Res; 2018 Feb; 46(3):e15. PubMed ID: 29155959
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles.
    Wang J; Czech B; Crunk A; Wallace A; Mitreva M; Hannon GJ; Davis RE
    Genome Res; 2011 Sep; 21(9):1462-77. PubMed ID: 21685128
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Emerging Classes of Small Non-Coding RNAs With Potential Implications in Diabetes and Associated Metabolic Disorders.
    Jacovetti C; Bayazit MB; Regazzi R
    Front Endocrinol (Lausanne); 2021; 12():670719. PubMed ID: 34040585
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Hybridization-based reconstruction of small non-coding RNA transcripts from deep sequencing data.
    Ragan C; Mowry BJ; Bauer DC
    Nucleic Acids Res; 2012 Sep; 40(16):7633-43. PubMed ID: 22705792
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Mining diverse small RNA species in the deep transcriptome.
    Vickers KC; Roteta LA; Hucheson-Dilks H; Han L; Guo Y
    Trends Biochem Sci; 2015 Jan; 40(1):4-7. PubMed ID: 25435401
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Unique small RNA signatures uncovered in the tammar wallaby genome.
    Lindsay J; Carone DM; Brown J; Hall L; Qureshi S; Mitchell SE; Jannetty N; Hannon G; Renfree M; Pask A; O'Neill M; O'Neill R
    BMC Genomics; 2012 Oct; 13():559. PubMed ID: 23075437
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Small RNAs derived from longer non-coding RNAs.
    Röther S; Meister G
    Biochimie; 2011 Nov; 93(11):1905-15. PubMed ID: 21843590
    [TBL] [Abstract][Full Text] [Related]  

  • 11. DASHR: database of small human noncoding RNAs.
    Leung YY; Kuksa PP; Amlie-Wolf A; Valladares O; Ungar LH; Kannan S; Gregory BD; Wang LS
    Nucleic Acids Res; 2016 Jan; 44(D1):D216-22. PubMed ID: 26553799
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification and characterization of small non-coding RNAs from Chinese fir by high throughput sequencing.
    Wan LC; Wang F; Guo X; Lu S; Qiu Z; Zhao Y; Zhang H; Lin J
    BMC Plant Biol; 2012 Aug; 12():146. PubMed ID: 22894611
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max.
    Zabala G; Campos E; Varala KK; Bloomfield S; Jones SI; Win H; Tuteja JH; Calla B; Clough SJ; Hudson M; Vodkin LO
    BMC Plant Biol; 2012 Oct; 12():177. PubMed ID: 23031057
    [TBL] [Abstract][Full Text] [Related]  

  • 14. FlaiMapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data.
    Hoogstrate Y; Jenster G; Martens-Uzunova ES
    Bioinformatics; 2015 Mar; 31(5):665-73. PubMed ID: 25338717
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNA-seq analysis of small RNPs in Trypanosoma brucei reveals a rich repertoire of non-coding RNAs.
    Michaeli S; Doniger T; Gupta SK; Wurtzel O; Romano M; Visnovezky D; Sorek R; Unger R; Ullu E
    Nucleic Acids Res; 2012 Feb; 40(3):1282-98. PubMed ID: 21976736
    [TBL] [Abstract][Full Text] [Related]  

  • 16. RNA-Seq analyses reveal the order of tRNA processing events and the maturation of C/D box and CRISPR RNAs in the hyperthermophile Methanopyrus kandleri.
    Su AA; Tripp V; Randau L
    Nucleic Acids Res; 2013 Jul; 41(12):6250-8. PubMed ID: 23620296
    [TBL] [Abstract][Full Text] [Related]  

  • 17. BlockClust: efficient clustering and classification of non-coding RNAs from short read RNA-seq profiles.
    Videm P; Rose D; Costa F; Backofen R
    Bioinformatics; 2014 Jun; 30(12):i274-82. PubMed ID: 24931994
    [TBL] [Abstract][Full Text] [Related]  

  • 18. De Novo Identification of sRNA Loci and Non-coding RNAs by High-Throughput Sequencing.
    Lunardon A; Forestan C; Farinati S; Varotto S
    Methods Mol Biol; 2018; 1675():297-314. PubMed ID: 29052198
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Identification of novel non-coding RNAs using profiles of short sequence reads from next generation sequencing data.
    Jung CH; Hansen MA; Makunin IV; Korbie DJ; Mattick JS
    BMC Genomics; 2010 Feb; 11():77. PubMed ID: 20113528
    [TBL] [Abstract][Full Text] [Related]  

  • 20. YM500v3: a database for small RNA sequencing in human cancer research.
    Chung IF; Chang SJ; Chen CY; Liu SH; Li CY; Chan CH; Shih CC; Cheng WC
    Nucleic Acids Res; 2017 Jan; 45(D1):D925-D931. PubMed ID: 27899625
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.