These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

512 related articles for article (PubMed ID: 24165883)

  • 1. IMG 4 version of the integrated microbial genomes comparative analysis system.
    Markowitz VM; Chen IM; Palaniappan K; Chu K; Szeto E; Pillay M; Ratner A; Huang J; Woyke T; Huntemann M; Anderson I; Billis K; Varghese N; Mavromatis K; Pati A; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D560-7. PubMed ID: 24165883
    [TBL] [Abstract][Full Text] [Related]  

  • 2. IMG: the Integrated Microbial Genomes database and comparative analysis system.
    Markowitz VM; Chen IM; Palaniappan K; Chu K; Szeto E; Grechkin Y; Ratner A; Jacob B; Huang J; Williams P; Huntemann M; Anderson I; Mavromatis K; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D115-22. PubMed ID: 22194640
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions.
    Markowitz VM; Szeto E; Palaniappan K; Grechkin Y; Chu K; Chen IM; Dubchak I; Anderson I; Lykidis A; Mavromatis K; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D528-33. PubMed ID: 17933782
    [TBL] [Abstract][Full Text] [Related]  

  • 4. IMG/M 4 version of the integrated metagenome comparative analysis system.
    Markowitz VM; Chen IM; Chu K; Szeto E; Palaniappan K; Pillay M; Ratner A; Huang J; Pagani I; Tringe S; Huntemann M; Billis K; Varghese N; Tennessen K; Mavromatis K; Pati A; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D568-73. PubMed ID: 24136997
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The integrated microbial genomes system: an expanding comparative analysis resource.
    Markowitz VM; Chen IM; Palaniappan K; Chu K; Szeto E; Grechkin Y; Ratner A; Anderson I; Lykidis A; Mavromatis K; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2010 Jan; 38(Database issue):D382-90. PubMed ID: 19864254
    [TBL] [Abstract][Full Text] [Related]  

  • 6. IMG/M: the integrated metagenome data management and comparative analysis system.
    Markowitz VM; Chen IM; Chu K; Szeto E; Palaniappan K; Grechkin Y; Ratner A; Jacob B; Pati A; Huntemann M; Liolios K; Pagani I; Anderson I; Mavromatis K; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2012 Jan; 40(Database issue):D123-9. PubMed ID: 22086953
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The integrated microbial genomes (IMG) system.
    Markowitz VM; Korzeniewski F; Palaniappan K; Szeto E; Werner G; Padki A; Zhao X; Dubchak I; Hugenholtz P; Anderson I; Lykidis A; Mavromatis K; Ivanova N; Kyrpides NC
    Nucleic Acids Res; 2006 Jan; 34(Database issue):D344-8. PubMed ID: 16381883
    [TBL] [Abstract][Full Text] [Related]  

  • 8. IMG/M: a data management and analysis system for metagenomes.
    Markowitz VM; Ivanova NN; Szeto E; Palaniappan K; Chu K; Dalevi D; Chen IM; Grechkin Y; Dubchak I; Anderson I; Lykidis A; Mavromatis K; Hugenholtz P; Kyrpides NC
    Nucleic Acids Res; 2008 Jan; 36(Database issue):D534-8. PubMed ID: 17932063
    [TBL] [Abstract][Full Text] [Related]  

  • 9. IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes.
    Chen IA; Chu K; Palaniappan K; Pillay M; Ratner A; Huang J; Huntemann M; Varghese N; White JR; Seshadri R; Smirnova T; Kirton E; Jungbluth SP; Woyke T; Eloe-Fadrosh EA; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2019 Jan; 47(D1):D666-D677. PubMed ID: 30289528
    [TBL] [Abstract][Full Text] [Related]  

  • 10. IMG ER: a system for microbial genome annotation expert review and curation.
    Markowitz VM; Mavromatis K; Ivanova NN; Chen IM; Chu K; Kyrpides NC
    Bioinformatics; 2009 Sep; 25(17):2271-8. PubMed ID: 19561336
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system.
    Chen IM; Markowitz VM; Palaniappan K; Szeto E; Chu K; Huang J; Ratner A; Pillay M; Hadjithomas M; Huntemann M; Mikhailova N; Ovchinnikova G; Ivanova NN; Kyrpides NC
    BMC Genomics; 2016 Apr; 17():307. PubMed ID: 27118214
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Gene context analysis in the Integrated Microbial Genomes (IMG) data management system.
    Mavromatis K; Chu K; Ivanova N; Hooper SD; Markowitz VM; Kyrpides NC
    PLoS One; 2009 Nov; 4(11):e7979. PubMed ID: 19956731
    [TBL] [Abstract][Full Text] [Related]  

  • 13. IMG/M: integrated genome and metagenome comparative data analysis system.
    Chen IA; Markowitz VM; Chu K; Palaniappan K; Szeto E; Pillay M; Ratner A; Huang J; Andersen E; Huntemann M; Varghese N; Hadjithomas M; Tennessen K; Nielsen T; Ivanova NN; Kyrpides NC
    Nucleic Acids Res; 2017 Jan; 45(D1):D507-D516. PubMed ID: 27738135
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Improving microbial genome annotations in an integrated database context.
    Chen IM; Markowitz VM; Chu K; Anderson I; Mavromatis K; Kyrpides NC; Ivanova NN
    PLoS One; 2013; 8(2):e54859. PubMed ID: 23424620
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparative genome analysis in the integrated microbial genomes (IMG) system.
    Markowitz VM; Kyrpides NC
    Methods Mol Biol; 2007; 395():35-56. PubMed ID: 17993666
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes.
    Mavromatis K; Ivanova NN; Chen IM; Szeto E; Markowitz VM; Kyrpides NC
    Stand Genomic Sci; 2009 Jul; 1(1):63-7. PubMed ID: 21304638
    [TBL] [Abstract][Full Text] [Related]  

  • 17. IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites.
    Hadjithomas M; Chen IM; Chu K; Ratner A; Palaniappan K; Szeto E; Huang J; Reddy TB; Cimermančič P; Fischbach MA; Ivanova NN; Markowitz VM; Kyrpides NC; Pati A
    mBio; 2015 Jul; 6(4):e00932. PubMed ID: 26173699
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Ten years of maintaining and expanding a microbial genome and metagenome analysis system.
    Markowitz VM; Chen IA; Chu K; Pati A; Ivanova NN; Kyrpides NC
    Trends Microbiol; 2015 Nov; 23(11):730-741. PubMed ID: 26439299
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The IMG/M data management and analysis system v.7: content updates and new features.
    Chen IA; Chu K; Palaniappan K; Ratner A; Huang J; Huntemann M; Hajek P; Ritter SJ; Webb C; Wu D; Varghese NJ; Reddy TBK; Mukherjee S; Ovchinnikova G; Nolan M; Seshadri R; Roux S; Visel A; Woyke T; Eloe-Fadrosh EA; Kyrpides NC; Ivanova NN
    Nucleic Acids Res; 2023 Jan; 51(D1):D723-D732. PubMed ID: 36382399
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DOE JGI Metagenome Workflow.
    Clum A; Huntemann M; Bushnell B; Foster B; Foster B; Roux S; Hajek PP; Varghese N; Mukherjee S; Reddy TBK; Daum C; Yoshinaga Y; O'Malley R; Seshadri R; Kyrpides NC; Eloe-Fadrosh EA; Chen IA; Copeland A; Ivanova NN
    mSystems; 2021 May; 6(3):. PubMed ID: 34006627
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 26.