These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

268 related articles for article (PubMed ID: 24180668)

  • 1. Path2Models: large-scale generation of computational models from biochemical pathway maps.
    Büchel F; Rodriguez N; Swainston N; Wrzodek C; Czauderna T; Keller R; Mittag F; Schubert M; Glont M; Golebiewski M; van Iersel M; Keating S; Rall M; Wybrow M; Hermjakob H; Hucka M; Kell DB; Müller W; Mendes P; Zell A; Chaouiya C; Saez-Rodriguez J; Schreiber F; Laibe C; Dräger A; Le Novère N
    BMC Syst Biol; 2013 Nov; 7():116. PubMed ID: 24180668
    [TBL] [Abstract][Full Text] [Related]  

  • 2. BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models.
    Li C; Donizelli M; Rodriguez N; Dharuri H; Endler L; Chelliah V; Li L; He E; Henry A; Stefan MI; Snoep JL; Hucka M; Le Novère N; Laibe C
    BMC Syst Biol; 2010 Jun; 4():92. PubMed ID: 20587024
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Integration of CellDesigner and SABIO-RK.
    Funahashi A; Jouraku A; Matsuoka Y; Kitano H
    In Silico Biol; 2007; 7(2 Suppl):S81-90. PubMed ID: 17822394
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Editing, validating and translating of SBGN maps.
    Czauderna T; Klukas C; Schreiber F
    Bioinformatics; 2010 Sep; 26(18):2340-1. PubMed ID: 20628075
    [TBL] [Abstract][Full Text] [Related]  

  • 5. METANNOGEN: compiling features of biochemical reactions needed for the reconstruction of metabolic networks.
    Gille C; Hoffmann S; Holzhütter HG
    BMC Syst Biol; 2007 Jan; 1():5. PubMed ID: 17408512
    [TBL] [Abstract][Full Text] [Related]  

  • 6. SBMLsqueezer 2: context-sensitive creation of kinetic equations in biochemical networks.
    Dräger A; Zielinski DC; Keller R; Rall M; Eichner J; Palsson BO; Zell A
    BMC Syst Biol; 2015 Oct; 9():68. PubMed ID: 26452770
    [TBL] [Abstract][Full Text] [Related]  

  • 7. An online model composition tool for system biology models.
    Coskun SA; Cicek AE; Lai N; Dash RK; Ozsoyoglu ZM; Ozsoyoglu G
    BMC Syst Biol; 2013 Sep; 7():88. PubMed ID: 24006914
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Computational modeling of biochemical networks using COPASI.
    Mendes P; Hoops S; Sahle S; Gauges R; Dada J; Kummer U
    Methods Mol Biol; 2009; 500():17-59. PubMed ID: 19399433
    [TBL] [Abstract][Full Text] [Related]  

  • 9. BioModels-15 years of sharing computational models in life science.
    Malik-Sheriff RS; Glont M; Nguyen TVN; Tiwari K; Roberts MG; Xavier A; Vu MT; Men J; Maire M; Kananathan S; Fairbanks EL; Meyer JP; Arankalle C; Varusai TM; Knight-Schrijver V; Li L; Dueñas-Roca C; Dass G; Keating SM; Park YM; Buso N; Rodriguez N; Hucka M; Hermjakob H
    Nucleic Acids Res; 2020 Jan; 48(D1):D407-D415. PubMed ID: 31701150
    [TBL] [Abstract][Full Text] [Related]  

  • 10. SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks.
    Dräger A; Hassis N; Supper J; Schröder A; Zell A
    BMC Syst Biol; 2008 Apr; 2():39. PubMed ID: 18447902
    [TBL] [Abstract][Full Text] [Related]  

  • 11. BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions.
    Schellenberger J; Park JO; Conrad TM; Palsson BØ
    BMC Bioinformatics; 2010 Apr; 11():213. PubMed ID: 20426874
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics.
    Haiman ZB; Zielinski DC; Koike Y; Yurkovich JT; Palsson BO
    PLoS Comput Biol; 2021 Jan; 17(1):e1008208. PubMed ID: 33507922
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Conversion of KEGG metabolic pathways to SBGN maps including automatic layout.
    Czauderna T; Wybrow M; Marriott K; Schreiber F
    BMC Bioinformatics; 2013 Aug; 14():250. PubMed ID: 23953132
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The SuBliMinaL Toolbox: automating steps in the reconstruction of metabolic networks.
    Swainston N; Smallbone K; Mendes P; Kell D; Paton N
    J Integr Bioinform; 2011 Nov; 8(2):186. PubMed ID: 22095399
    [TBL] [Abstract][Full Text] [Related]  

  • 15. CellPublisher: a web platform for the intuitive visualization and sharing of metabolic, signalling and regulatory pathways.
    Flórez LA; Lammers CR; Michna R; Stülke J
    Bioinformatics; 2010 Dec; 26(23):2997-9. PubMed ID: 20947526
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Systematic integration of experimental data and models in systems biology.
    Li P; Dada JO; Jameson D; Spasic I; Swainston N; Carroll K; Dunn W; Khan F; Malys N; Messiha HL; Simeonidis E; Weichart D; Winder C; Wishart J; Broomhead DS; Goble CA; Gaskell SJ; Kell DB; Westerhoff HV; Mendes P; Paton NW
    BMC Bioinformatics; 2010 Nov; 11():582. PubMed ID: 21114840
    [TBL] [Abstract][Full Text] [Related]  

  • 17. KiMoSys: a web-based repository of experimental data for KInetic MOdels of biological SYStems.
    Costa RS; Veríssimo A; Vinga S
    BMC Syst Biol; 2014 Aug; 8():85. PubMed ID: 25115331
    [TBL] [Abstract][Full Text] [Related]  

  • 18. KEGGconverter: a tool for the in-silico modelling of metabolic networks of the KEGG Pathways database.
    Moutselos K; Kanaris I; Chatziioannou A; Maglogiannis I; Kolisis FN
    BMC Bioinformatics; 2009 Oct; 10():324. PubMed ID: 19814801
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CRA toolbox: software package for conditional robustness analysis of cancer systems biology models in MATLAB.
    Bianconi F; Antonini C; Tomassoni L; Valigi P
    BMC Bioinformatics; 2019 Jul; 20(1):385. PubMed ID: 31288758
    [TBL] [Abstract][Full Text] [Related]  

  • 20. An application programming interface for CellNetAnalyzer.
    Klamt S; von Kamp A
    Biosystems; 2011 Aug; 105(2):162-8. PubMed ID: 21315797
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.