BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

93 related articles for article (PubMed ID: 24195105)

  • 1. Improved accuracy for label-free absolute quantification of proteome by combining the Absolute Protein EXpression profiling algorithm and summed tandem mass spectrometric total ion current.
    Wu Q; Shan Y; Qu Y; Jiang H; Yuan H; Liu J; Zhang S; Liang Z; Zhang L; Zhang Y
    Analyst; 2014 Jan; 139(1):138-46. PubMed ID: 24195105
    [TBL] [Abstract][Full Text] [Related]  

  • 2. NSI and NSMT: usages of MS/MS fragment ion intensity for sensitive differential proteome detection and accurate protein fold change calculation in relative label-free proteome quantification.
    Wu Q; Zhao Q; Liang Z; Qu Y; Zhang L; Zhang Y
    Analyst; 2012 Jul; 137(13):3146-53. PubMed ID: 22582177
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Critical assessment of proteome-wide label-free absolute abundance estimation strategies.
    Ahrné E; Molzahn L; Glatter T; Schmidt A
    Proteomics; 2013 Sep; 13(17):2567-78. PubMed ID: 23794183
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The APEX Quantitative Proteomics Tool: generating protein quantitation estimates from LC-MS/MS proteomics results.
    Braisted JC; Kuntumalla S; Vogel C; Marcotte EM; Rodrigues AR; Wang R; Huang ST; Ferlanti ES; Saeed AI; Fleischmann RD; Peterson SN; Pieper R
    BMC Bioinformatics; 2008 Dec; 9():529. PubMed ID: 19068132
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RIBAR and xRIBAR: Methods for reproducible relative MS/MS-based label-free protein quantification.
    Colaert N; Gevaert K; Martens L
    J Proteome Res; 2011 Jul; 10(7):3183-9. PubMed ID: 21604685
    [TBL] [Abstract][Full Text] [Related]  

  • 6. MSE for Label-Free Absolute Protein Quantification in Complex Proteomes.
    Helm S; Baginsky S
    Methods Mol Biol; 2018; 1696():235-247. PubMed ID: 29086408
    [TBL] [Abstract][Full Text] [Related]  

  • 7. SWATH enables precise label-free quantification on proteome scale.
    Huang Q; Yang L; Luo J; Guo L; Wang Z; Yang X; Jin W; Fang Y; Ye J; Shan B; Zhang Y
    Proteomics; 2015 Apr; 15(7):1215-23. PubMed ID: 25560523
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Isotope coded protein label quantification of serum proteins--comparison with the label-free LC-MS and validation using the MRM approach.
    Turtoi A; Mazzucchelli GD; De Pauw E
    Talanta; 2010 Feb; 80(4):1487-95. PubMed ID: 20082806
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Calculating absolute and relative protein abundance from mass spectrometry-based protein expression data.
    Vogel C; Marcotte EM
    Nat Protoc; 2008; 3(9):1444-51. PubMed ID: 18772871
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Comparative evaluation of label-free SINQ normalized spectral index quantitation in the central proteomics facilities pipeline.
    Trudgian DC; Ridlova G; Fischer R; Mackeen MM; Ternette N; Acuto O; Kessler BM; Thomas B
    Proteomics; 2011 Jul; 11(14):2790-7. PubMed ID: 21656681
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Quantitative proteome analysis using isobaric peptide termini labeling (IPTL).
    Arntzen MO; Koehler CJ; Treumann A; Thiede B
    Methods Mol Biol; 2011; 753():65-76. PubMed ID: 21604116
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation.
    Lu P; Vogel C; Wang R; Yao X; Marcotte EM
    Nat Biotechnol; 2007 Jan; 25(1):117-24. PubMed ID: 17187058
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Tools for label-free peptide quantification.
    Nahnsen S; Bielow C; Reinert K; Kohlbacher O
    Mol Cell Proteomics; 2013 Mar; 12(3):549-56. PubMed ID: 23250051
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Cross-correlation of spectral count ranking to validate quantitative proteome measurements.
    Kannaste O; Suomi T; Salmi J; Uusipaikka E; Nevalainen O; Corthals GL
    J Proteome Res; 2014 Apr; 13(4):1957-68. PubMed ID: 24611565
    [TBL] [Abstract][Full Text] [Related]  

  • 15. freeQuant: A Mass Spectrometry Label-Free Quantification Software Tool for Complex Proteome Analysis.
    Deng N; Li Z; Pan C; Duan H
    ScientificWorldJournal; 2015; 2015():137076. PubMed ID: 26665161
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Ranking Fragment Ions Based on Outlier Detection for Improved Label-Free Quantification in Data-Independent Acquisition LC-MS/MS.
    Bilbao A; Zhang Y; Varesio E; Luban J; Strambio-De-Castillia C; Lisacek F; Hopfgartner G
    J Proteome Res; 2015 Nov; 14(11):4581-93. PubMed ID: 26412574
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Improved reporter ion assignment of raw isobaric stable isotope labeled liquid chromatography/matrix-assisted laser desorption/ionization tandem time-of-flight mass spectral data for quantitative proteomics.
    Jakoby T; Tholey A; van den Berg BH
    Rapid Commun Mass Spectrom; 2012 Dec; 26(23):2777-85. PubMed ID: 23124669
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An exclusion list based label-free proteome quantification approach using an LTQ Orbitrap.
    Muntel J; Hecker M; Becher D
    Rapid Commun Mass Spectrom; 2012 Mar; 26(6):701-9. PubMed ID: 22328225
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comparative evaluation of label-free quantification methods for shotgun proteomics.
    Bubis JA; Levitsky LI; Ivanov MV; Tarasova IA; Gorshkov MV
    Rapid Commun Mass Spectrom; 2017 Apr; 31(7):606-612. PubMed ID: 28097710
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Spectral counting robust on high mass accuracy mass spectrometers.
    Hoehenwarter W; Wienkoop S
    Rapid Commun Mass Spectrom; 2010 Dec; 24(24):3609-14. PubMed ID: 21108307
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.