These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

241 related articles for article (PubMed ID: 24218635)

  • 1. Beyond the ENCODE project: using genomics and epigenomics strategies to study enhancer evolution.
    Sakabe NJ; Nobrega MA
    Philos Trans R Soc Lond B Biol Sci; 2013 Dec; 368(1632):20130022. PubMed ID: 24218635
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genomic Characterization of Endothelial Enhancers Reveals a Multifunctional Role for NR2F2 in Regulation of Arteriovenous Gene Expression.
    Sissaoui S; Yu J; Yan A; Li R; Yukselen O; Kucukural A; Zhu LJ; Lawson ND
    Circ Res; 2020 Mar; 126(7):875-888. PubMed ID: 32065070
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The cis-Regulatory Atlas of the Mouse Immune System.
    Yoshida H; Lareau CA; Ramirez RN; Rose SA; Maier B; Wroblewska A; Desland F; Chudnovskiy A; Mortha A; Dominguez C; Tellier J; Kim E; Dwyer D; Shinton S; Nabekura T; Qi Y; Yu B; Robinette M; Kim KW; Wagers A; Rhoads A; Nutt SL; Brown BD; Mostafavi S; Buenrostro JD; Benoist C;
    Cell; 2019 Feb; 176(4):897-912.e20. PubMed ID: 30686579
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A map of the cis-regulatory sequences in the mouse genome.
    Shen Y; Yue F; McCleary DF; Ye Z; Edsall L; Kuan S; Wagner U; Dixon J; Lee L; Lobanenkov VV; Ren B
    Nature; 2012 Aug; 488(7409):116-20. PubMed ID: 22763441
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants.
    Parker SC; Stitzel ML; Taylor DL; Orozco JM; Erdos MR; Akiyama JA; van Bueren KL; Chines PS; Narisu N; ; Black BL; Visel A; Pennacchio LA; Collins FS; ;
    Proc Natl Acad Sci U S A; 2013 Oct; 110(44):17921-6. PubMed ID: 24127591
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics.
    Bravo González-Blas C; Quan XJ; Duran-Romaña R; Taskiran II; Koldere D; Davie K; Christiaens V; Makhzami S; Hulselmans G; de Waegeneer M; Mauduit D; Poovathingal S; Aibar S; Aerts S
    Mol Syst Biol; 2020 May; 16(5):e9438. PubMed ID: 32431014
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identification of activated enhancers and linked transcription factors in breast, prostate, and kidney tumors by tracing enhancer networks using epigenetic traits.
    Rhie SK; Guo Y; Tak YG; Yao L; Shen H; Coetzee GA; Laird PW; Farnham PJ
    Epigenetics Chromatin; 2016; 9():50. PubMed ID: 27833659
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Contribution of transposable elements and distal enhancers to evolution of human-specific features of interphase chromatin architecture in embryonic stem cells.
    Glinsky GV
    Chromosome Res; 2018 Mar; 26(1-2):61-84. PubMed ID: 29335803
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Towards genome-wide prediction and characterization of enhancers in plants.
    Marand AP; Zhang T; Zhu B; Jiang J
    Biochim Biophys Acta Gene Regul Mech; 2017 Jan; 1860(1):131-139. PubMed ID: 27321818
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Phylogenetic and Epigenetic Footprinting of the Putative Enhancers of the Peg3 Domain.
    Kim J; Ye A
    PLoS One; 2016; 11(4):e0154216. PubMed ID: 27104590
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence.
    Wittkopp PJ; Kalay G
    Nat Rev Genet; 2011 Dec; 13(1):59-69. PubMed ID: 22143240
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Integration of 198 ChIP-seq datasets reveals human cis-regulatory regions.
    Bolouri H; Ruzzo WL
    J Comput Biol; 2012 Sep; 19(9):989-97. PubMed ID: 22897152
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Accurate Promoter and Enhancer Identification in 127 ENCODE and Roadmap Epigenomics Cell Types and Tissues by GenoSTAN.
    Zacher B; Michel M; Schwalb B; Cramer P; Tresch A; Gagneur J
    PLoS One; 2017; 12(1):e0169249. PubMed ID: 28056037
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Many human accelerated regions are developmental enhancers.
    Capra JA; Erwin GD; McKinsey G; Rubenstein JL; Pollard KS
    Philos Trans R Soc Lond B Biol Sci; 2013 Dec; 368(1632):20130025. PubMed ID: 24218637
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Enhancer activity-based identification of functional enhancers using zebrafish embryos.
    Taminato T; Yokota D; Araki S; Ovara H; Yamasu K; Kawamura A
    Genomics; 2016 Aug; 108(2):102-7. PubMed ID: 27256877
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Specific subfamilies of transposable elements contribute to different domains of T lymphocyte enhancers.
    Ye M; Goudot C; Hoyler T; Lemoine B; Amigorena S; Zueva E
    Proc Natl Acad Sci U S A; 2020 Apr; 117(14):7905-7916. PubMed ID: 32193341
    [TBL] [Abstract][Full Text] [Related]  

  • 17. ChIP-ping the branches of the tree: functional genomics and the evolution of eukaryotic gene regulation.
    Marinov GK; Kundaje A
    Brief Funct Genomics; 2018 Mar; 17(2):116-137. PubMed ID: 29529131
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Demystifying the secret mission of enhancers: linking distal regulatory elements to target genes.
    Yao L; Berman BP; Farnham PJ
    Crit Rev Biochem Mol Biol; 2015; 50(6):550-73. PubMed ID: 26446758
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Differences in enhancer activity in mouse and zebrafish reporter assays are often associated with changes in gene expression.
    Ariza-Cosano A; Visel A; Pennacchio LA; Fraser HB; Gómez-Skarmeta JL; Irimia M; Bessa J
    BMC Genomics; 2012 Dec; 13():713. PubMed ID: 23253453
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Conserved and non-conserved enhancers direct tissue specific transcription in ancient germ layer specific developmental control genes.
    Chatterjee S; Bourque G; Lufkin T
    BMC Dev Biol; 2011 Oct; 11():63. PubMed ID: 22011226
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.