BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

182 related articles for article (PubMed ID: 24225050)

  • 1. 3DScapeCS: application of three dimensional, parallel, dynamic network visualization in Cytoscape.
    Wang Q; Tang B; Song L; Ren B; Liang Q; Xie F; Zhuo Y; Liu X; Zhang L
    BMC Bioinformatics; 2013 Nov; 14():322. PubMed ID: 24225050
    [TBL] [Abstract][Full Text] [Related]  

  • 2. BisoGenet: a new tool for gene network building, visualization and analysis.
    Martin A; Ochagavia ME; Rabasa LC; Miranda J; Fernandez-de-Cossio J; Bringas R
    BMC Bioinformatics; 2010 Feb; 11():91. PubMed ID: 20163717
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Visualization of protein interaction networks: problems and solutions.
    Agapito G; Guzzi PH; Cannataro M
    BMC Bioinformatics; 2013; 14 Suppl 1(Suppl 1):S1. PubMed ID: 23368786
    [TBL] [Abstract][Full Text] [Related]  

  • 4. CytoITMprobe: a network information flow plugin for Cytoscape.
    Stojmirović A; Bliskovsky A; Yu YK
    BMC Res Notes; 2012 May; 5():237. PubMed ID: 22587372
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Orthoscape: a cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles.
    Mustafin ZS; Lashin SA; Matushkin YG; Gunbin KV; Afonnikov DA
    BMC Bioinformatics; 2017 Jan; 18(Suppl 1):1427. PubMed ID: 28466792
    [TBL] [Abstract][Full Text] [Related]  

  • 6. FORG3D: force-directed 3D graph editor for visualization of integrated genome scale data.
    Paananen J; Wong G
    BMC Syst Biol; 2009 Feb; 3():26. PubMed ID: 19239683
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DrugViz: a Cytoscape plugin for visualizing and analyzing small molecule drugs in biological networks.
    Xiong B; Liu K; Wu J; Burk DL; Jiang H; Shen J
    Bioinformatics; 2008 Sep; 24(18):2117-8. PubMed ID: 18658180
    [TBL] [Abstract][Full Text] [Related]  

  • 8. GenePro: a Cytoscape plug-in for advanced visualization and analysis of interaction networks.
    Vlasblom J; Wu S; Pu S; Superina M; Liu G; Orsi C; Wodak SJ
    Bioinformatics; 2006 Sep; 22(17):2178-9. PubMed ID: 16921162
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Cytoscape StringApp: Network Analysis and Visualization of Proteomics Data.
    Doncheva NT; Morris JH; Gorodkin J; Jensen LJ
    J Proteome Res; 2019 Feb; 18(2):623-632. PubMed ID: 30450911
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Three-dimensional visualization of protein interaction networks.
    Han K; Byun Y
    Comput Biol Med; 2004 Mar; 34(2):127-39. PubMed ID: 14972632
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ProteoLens: a visual analytic tool for multi-scale database-driven biological network data mining.
    Huan T; Sivachenko AY; Harrison SH; Chen JY
    BMC Bioinformatics; 2008 Aug; 9 Suppl 9(Suppl 9):S5. PubMed ID: 18793469
    [TBL] [Abstract][Full Text] [Related]  

  • 12. CABIN: collective analysis of biological interaction networks.
    Singhal M; Domico K
    Comput Biol Chem; 2007 Jun; 31(3):222-5. PubMed ID: 17500038
    [TBL] [Abstract][Full Text] [Related]  

  • 13. XlinkCyNET: A Cytoscape Application for Visualization of Protein Interaction Networks Based on Cross-Linking Mass Spectrometry Identifications.
    Lima DB; Zhu Y; Liu F
    J Proteome Res; 2021 Apr; 20(4):1943-1950. PubMed ID: 33689356
    [TBL] [Abstract][Full Text] [Related]  

  • 14. JNets: exploring networks by integrating annotation.
    Macpherson JI; Pinney JW; Robertson DL
    BMC Bioinformatics; 2009 Mar; 10():95. PubMed ID: 19323810
    [TBL] [Abstract][Full Text] [Related]  

  • 15. structureViz: linking Cytoscape and UCSF Chimera.
    Morris JH; Huang CC; Babbitt PC; Ferrin TE
    Bioinformatics; 2007 Sep; 23(17):2345-7. PubMed ID: 17623706
    [TBL] [Abstract][Full Text] [Related]  

  • 16. GALANT: a Cytoscape plugin for visualizing data as functional landscapes projected onto biological networks.
    Camilo E; Bovolenta LA; Acencio ML; Rybarczyk-Filho JL; Castro MA; Moreira JC; Lemke N
    Bioinformatics; 2013 Oct; 29(19):2505-6. PubMed ID: 23894138
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Integrating and annotating the interactome using the MiMI plugin for cytoscape.
    Gao J; Ade AS; Tarcea VG; Weymouth TE; Mirel BR; Jagadish HV; States DJ
    Bioinformatics; 2009 Jan; 25(1):137-8. PubMed ID: 18812364
    [TBL] [Abstract][Full Text] [Related]  

  • 18. CytoNCA: a cytoscape plugin for centrality analysis and evaluation of protein interaction networks.
    Tang Y; Li M; Wang J; Pan Y; Wu FX
    Biosystems; 2015 Jan; 127():67-72. PubMed ID: 25451770
    [TBL] [Abstract][Full Text] [Related]  

  • 19. DeDaL: Cytoscape 3 app for producing and morphing data-driven and structure-driven network layouts.
    Czerwinska U; Calzone L; Barillot E; Zinovyev A
    BMC Syst Biol; 2015 Aug; 9():46. PubMed ID: 26271256
    [TBL] [Abstract][Full Text] [Related]  

  • 20. GOlorize: a Cytoscape plug-in for network visualization with Gene Ontology-based layout and coloring.
    Garcia O; Saveanu C; Cline M; Fromont-Racine M; Jacquier A; Schwikowski B; Aittokallio T
    Bioinformatics; 2007 Feb; 23(3):394-6. PubMed ID: 17127678
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.