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5. Enzyme architecture: deconstruction of the enzyme-activating phosphodianion interactions of orotidine 5'-monophosphate decarboxylase. Goldman LM; Amyes TL; Goryanova B; Gerlt JA; Richard JP J Am Chem Soc; 2014 Jul; 136(28):10156-65. PubMed ID: 24958125 [TBL] [Abstract][Full Text] [Related]
6. Role of a guanidinium cation-phosphodianion pair in stabilizing the vinyl carbanion intermediate of orotidine 5'-phosphate decarboxylase-catalyzed reactions. Goryanova B; Goldman LM; Amyes TL; Gerlt JA; Richard JP Biochemistry; 2013 Oct; 52(42):7500-11. PubMed ID: 24053466 [TBL] [Abstract][Full Text] [Related]
7. Activation of orotidine 5'-monophosphate decarboxylase by phosphite dianion: the whole substrate is the sum of two parts. Amyes TL; Richard JP; Tait JJ J Am Chem Soc; 2005 Nov; 127(45):15708-9. PubMed ID: 16277505 [TBL] [Abstract][Full Text] [Related]
8. Orotidine 5'-Monophosphate Decarboxylase: Probing the Limits of the Possible for Enzyme Catalysis. Richard JP; Amyes TL; Reyes AC Acc Chem Res; 2018 Apr; 51(4):960-969. PubMed ID: 29595949 [TBL] [Abstract][Full Text] [Related]
9. Catalysis by orotidine 5'-monophosphate decarboxylase: effect of 5-fluoro and 4'-substituents on the decarboxylation of two-part substrates. Goryanova B; Spong K; Amyes TL; Richard JP Biochemistry; 2013 Jan; 52(3):537-46. PubMed ID: 23276261 [TBL] [Abstract][Full Text] [Related]
10. Orotidine 5'-monophosphate decarboxylase: transition state stabilization from remote protein-phosphodianion interactions. Amyes TL; Ming SA; Goldman LM; Wood BM; Desai BJ; Gerlt JA; Richard JP Biochemistry; 2012 Jun; 51(23):4630-2. PubMed ID: 22620855 [TBL] [Abstract][Full Text] [Related]
11. Role of the Carboxylate in Enzyme-Catalyzed Decarboxylation of Orotidine 5'-Monophosphate: Transition State Stabilization Dominates Over Ground State Destabilization. Goryanova B; Amyes TL; Richard JP J Am Chem Soc; 2019 Aug; 141(34):13468-13478. PubMed ID: 31365243 [TBL] [Abstract][Full Text] [Related]
12. An examination of the relationship between active site loop size and thermodynamic activation parameters for orotidine 5'-monophosphate decarboxylase from mesophilic and thermophilic organisms. Toth K; Amyes TL; Wood BM; Chan KK; Gerlt JA; Richard JP Biochemistry; 2009 Aug; 48(33):8006-13. PubMed ID: 19618917 [TBL] [Abstract][Full Text] [Related]
13. QM/MM metadynamics study of the direct decarboxylation mechanism for orotidine-5'-monophosphate decarboxylase using two different QM regions: acceleration too small to explain rate of enzyme catalysis. Stanton CL; Kuo IF; Mundy CJ; Laino T; Houk KN J Phys Chem B; 2007 Nov; 111(43):12573-81. PubMed ID: 17927240 [TBL] [Abstract][Full Text] [Related]
14. Specificity in transition state binding: the Pauling model revisited. Amyes TL; Richard JP Biochemistry; 2013 Mar; 52(12):2021-35. PubMed ID: 23327224 [TBL] [Abstract][Full Text] [Related]
15. Adenylate Kinase-Catalyzed Reactions of AMP in Pieces: Specificity for Catalysis at the Nucleoside Activator and Dianion Catalytic Sites. Fernandez PL; Richard JP Biochemistry; 2022 Dec; 61(23):2766-2775. PubMed ID: 36413937 [TBL] [Abstract][Full Text] [Related]
16. Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme. Desai BJ; Wood BM; Fedorov AA; Fedorov EV; Goryanova B; Amyes TL; Richard JP; Almo SC; Gerlt JA Biochemistry; 2012 Oct; 51(43):8665-78. PubMed ID: 23030629 [TBL] [Abstract][Full Text] [Related]
17. Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: mechanistic evidence for a proton relay system in the active site of 3-keto-L-gulonate 6-phosphate decarboxylase. Yew WS; Wise EL; Rayment I; Gerlt JA Biochemistry; 2004 Jun; 43(21):6427-37. PubMed ID: 15157077 [TBL] [Abstract][Full Text] [Related]
18. Mechanism of OMP decarboxylation in orotidine 5'-monophosphate decarboxylase. Hu H; Boone A; Yang W J Am Chem Soc; 2008 Nov; 130(44):14493-503. PubMed ID: 18839943 [TBL] [Abstract][Full Text] [Related]
19. Rate and Equilibrium Constants for an Enzyme Conformational Change during Catalysis by Orotidine 5'-Monophosphate Decarboxylase. Goryanova B; Goldman LM; Ming S; Amyes TL; Gerlt JA; Richard JP Biochemistry; 2015 Jul; 54(29):4555-64. PubMed ID: 26135041 [TBL] [Abstract][Full Text] [Related]
20. OMP decarboxylase: phosphodianion binding energy is used to stabilize a vinyl carbanion intermediate. Goryanova B; Amyes TL; Gerlt JA; Richard JP J Am Chem Soc; 2011 May; 133(17):6545-8. PubMed ID: 21486036 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]