These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

715 related articles for article (PubMed ID: 24278466)

  • 1. Gene expression, single nucleotide variant and fusion transcript discovery in archival material from breast tumors.
    Norton N; Sun Z; Asmann YW; Serie DJ; Necela BM; Bhagwate A; Jen J; Eckloff BW; Kalari KR; Thompson KJ; Carr JM; Kachergus JM; Geiger XJ; Perez EA; Thompson EA
    PLoS One; 2013; 8(11):e81925. PubMed ID: 24278466
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparison of RNA-Seq by poly (A) capture, ribosomal RNA depletion, and DNA microarray for expression profiling.
    Zhao W; He X; Hoadley KA; Parker JS; Hayes DN; Perou CM
    BMC Genomics; 2014 Jun; 15(1):419. PubMed ID: 24888378
    [TBL] [Abstract][Full Text] [Related]  

  • 3. mRNA-seq whole transcriptome profiling of fresh frozen versus archived fixed tissues.
    Bossel Ben-Moshe N; Gilad S; Perry G; Benjamin S; Balint-Lahat N; Pavlovsky A; Halperin S; Markus B; Yosepovich A; Barshack I; Gal-Yam EN; Domany E; Kaufman B; Dadiani M
    BMC Genomics; 2018 May; 19(1):419. PubMed ID: 29848287
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Study on the use of Nanostring nCounter to analyze RNA extracted from formalin-fixed-paraffin-embedded and fresh frozen bladder cancer tissues.
    Zheng CM; Piao XM; Byun YJ; Song SJ; Kim SK; Moon SK; Choi YH; Kang HW; Kim WT; Kim YJ; Lee SC; Kim WJ; Yun SJ
    Cancer Genet; 2022 Nov; 268-269():137-143. PubMed ID: 36368127
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Whole-Transcriptome profiling of formalin-fixed, paraffin-embedded renal cell carcinoma by RNA-seq.
    Li P; Conley A; Zhang H; Kim HL
    BMC Genomics; 2014 Dec; 15(1):1087. PubMed ID: 25495041
    [TBL] [Abstract][Full Text] [Related]  

  • 6. mRNA transcript quantification in archival samples using multiplexed, color-coded probes.
    Reis PP; Waldron L; Goswami RS; Xu W; Xuan Y; Perez-Ordonez B; Gullane P; Irish J; Jurisica I; Kamel-Reid S
    BMC Biotechnol; 2011 May; 11():46. PubMed ID: 21549012
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Fusion transcript discovery in formalin-fixed paraffin-embedded human breast cancer tissues reveals a link to tumor progression.
    Ma Y; Ambannavar R; Stephans J; Jeong J; Dei Rossi A; Liu ML; Friedman AJ; Londry JJ; Abramson R; Beasley EM; Baker J; Levy S; Qu K
    PLoS One; 2014; 9(4):e94202. PubMed ID: 24727804
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Mining the Archives: A Cross-Platform Analysis of Gene Expression Profiles in Archival Formalin-Fixed Paraffin-Embedded Tissues.
    Webster AF; Zumbo P; Fostel J; Gandara J; Hester SD; Recio L; Williams A; Wood CE; Yauk CL; Mason CE
    Toxicol Sci; 2015 Dec; 148(2):460-72. PubMed ID: 26361796
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A Method to Correlate mRNA Expression Datasets Obtained from Fresh Frozen and Formalin-Fixed, Paraffin-Embedded Tissue Samples: A Matter of Thresholds.
    Mustafa DA; Sieuwerts AM; Smid M; de Weerd V; van der Weiden M; Meijer-van Gelder ME; Martens JW; Foekens JA; Kros JM
    PLoS One; 2015; 10(12):e0144097. PubMed ID: 26716838
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Comparison of Two Illumina Whole Transcriptome RNA Sequencing Library Preparation Methods Using Human Cancer FFPE Specimens.
    Wang D; Rolfe PA; Foernzler D; O'Rourke D; Zhao S; Scheuenpflug J; Feng Z
    Technol Cancer Res Treat; 2022; 21():15330338221076304. PubMed ID: 35138205
    [No Abstract]   [Full Text] [Related]  

  • 11. Gene expression profiles from formalin fixed paraffin embedded breast cancer tissue are largely comparable to fresh frozen matched tissue.
    Mittempergher L; de Ronde JJ; Nieuwland M; Kerkhoven RM; Simon I; Rutgers EJ; Wessels LF; Van't Veer LJ
    PLoS One; 2011 Feb; 6(2):e17163. PubMed ID: 21347257
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Comparing Platforms for Messenger RNA Expression Profiling of Archival Formalin-Fixed, Paraffin-Embedded Tissues.
    Tyekucheva S; Martin NE; Stack EC; Wei W; Vathipadiekal V; Waldron L; Fiorentino M; Lis RT; Stampfer MJ; Loda M; Parmigiani G; Mucci LA; Birrer M
    J Mol Diagn; 2015 Jul; 17(4):374-81. PubMed ID: 25937617
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Identification of mRNAs and lincRNAs associated with lung cancer progression using next-generation RNA sequencing from laser micro-dissected archival FFPE tissue specimens.
    Morton ML; Bai X; Merry CR; Linden PA; Khalil AM; Leidner RS; Thompson CL
    Lung Cancer; 2014 Jul; 85(1):31-39. PubMed ID: 24735754
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Identification and validation of differentially expressed transcripts by RNA-sequencing of formalin-fixed, paraffin-embedded (FFPE) lung tissue from patients with Idiopathic Pulmonary Fibrosis.
    Vukmirovic M; Herazo-Maya JD; Blackmon J; Skodric-Trifunovic V; Jovanovic D; Pavlovic S; Stojsic J; Zeljkovic V; Yan X; Homer R; Stefanovic B; Kaminski N
    BMC Pulm Med; 2017 Jan; 17(1):15. PubMed ID: 28081703
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNA-seq RNAaccess identified as the preferred method for gene expression analysis of low quality FFPE samples.
    Song K; Elboudwarej E; Zhao X; Zhuo L; Pan D; Liu J; Brachmann C; Patterson SD; Yoon OK; Zavodovskaya M
    PLoS One; 2023; 18(10):e0293400. PubMed ID: 37883360
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Application of the 3' mRNA-Seq using unique molecular identifiers in highly degraded RNA derived from formalin-fixed, paraffin-embedded tissue.
    Jang JS; Holicky E; Lau J; McDonough S; Mutawe M; Koster MJ; Warrington KJ; Cuninngham JM
    BMC Genomics; 2021 Oct; 22(1):759. PubMed ID: 34689749
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data.
    Tang X; Baheti S; Shameer K; Thompson KJ; Wills Q; Niu N; Holcomb IN; Boutet SC; Ramakrishnan R; Kachergus JM; Kocher JP; Weinshilboum RM; Wang L; Thompson EA; Kalari KR
    Nucleic Acids Res; 2014 Dec; 42(22):e172. PubMed ID: 25352556
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RNA-seq from archival FFPE breast cancer samples: molecular pathway fidelity and novel discovery.
    Pennock ND; Jindal S; Horton W; Sun D; Narasimhan J; Carbone L; Fei SS; Searles R; Harrington CA; Burchard J; Weinmann S; Schedin P; Xia Z
    BMC Med Genomics; 2019 Dec; 12(1):195. PubMed ID: 31856832
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Validation of the Complexity INdex in SARComas prognostic signature on formalin-fixed, paraffin-embedded, soft-tissue sarcomas.
    Le Guellec S; Lesluyes T; Sarot E; Valle C; Filleron T; Rochaix P; Valentin T; PĂ©rot G; Coindre JM; Chibon F
    Ann Oncol; 2018 Aug; 29(8):1828-1835. PubMed ID: 29860427
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Sarcoma Subgrouping by Detection of Fusion Transcripts Using NanoString nCounter Technology.
    Sheth J; Arnoldo A; Zhong Y; Marrano P; Pereira C; Ryall S; Thorner P; Hawkins C; Somers GR
    Pediatr Dev Pathol; 2019; 22(3):205-213. PubMed ID: 30089422
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 36.