531 related articles for article (PubMed ID: 24303988)
1. Docking studies on DNA intercalators.
Gilad Y; Senderowitz H
J Chem Inf Model; 2014 Jan; 54(1):96-107. PubMed ID: 24303988
[TBL] [Abstract][Full Text] [Related]
2. Molecular docking of intercalators and groove-binders to nucleic acids using Autodock and Surflex.
Holt PA; Chaires JB; Trent JO
J Chem Inf Model; 2008 Aug; 48(8):1602-15. PubMed ID: 18642866
[TBL] [Abstract][Full Text] [Related]
3. Daunomycin intercalation stabilizes distinct backbone conformations of DNA.
Trieb M; Rauch C; Wellenzohn B; Wibowo F; Loerting T; Mayer E; Liedl KR
J Biomol Struct Dyn; 2004 Apr; 21(5):713-24. PubMed ID: 14769064
[TBL] [Abstract][Full Text] [Related]
4. Small molecule intercalation with double stranded DNA: implications for normal gene regulation and for predicting the biological efficacy and genotoxicity of drugs and other chemicals.
Hendry LB; Mahesh VB; Bransome ED; Ewing DE
Mutat Res; 2007 Oct; 623(1-2):53-71. PubMed ID: 17449065
[TBL] [Abstract][Full Text] [Related]
5. The interaction between the novel intercalator diethidium cation and B-form DNA: a theoretical study.
Monaco RR; Polkosnik W
J Biomol Struct Dyn; 1996 Aug; 14(1):13-9. PubMed ID: 8877557
[TBL] [Abstract][Full Text] [Related]
6. Docking studies on DNA-ligand interactions: building and application of a protocol to identify the binding mode.
Ricci CG; Netz PA
J Chem Inf Model; 2009 Aug; 49(8):1925-35. PubMed ID: 19655805
[TBL] [Abstract][Full Text] [Related]
7. A theory of mode of action of azolylalkylquinolines as DNA binding agents using automated flexible ligand docking.
Sobhani AM; Amini SR; Tyndall JD; Azizi E; Daneshtalab M; Khalaj A
J Mol Graph Model; 2006 Dec; 25(4):459-69. PubMed ID: 16621634
[TBL] [Abstract][Full Text] [Related]
8. Dynamics simulation of the interaction between the novel intercalator diethidium cation and B-form DNA.
Monaco RR; Polkosnik W; Dwarakanath S
J Biomol Struct Dyn; 1997 Aug; 15(1):63-7. PubMed ID: 9283980
[TBL] [Abstract][Full Text] [Related]
9. Recent advances in small organic molecules as DNA intercalating agents: synthesis, activity, and modeling.
Rescifina A; Zagni C; Varrica MG; Pistarà V; Corsaro A
Eur J Med Chem; 2014 Mar; 74():95-115. PubMed ID: 24448420
[TBL] [Abstract][Full Text] [Related]
10. The consequences of scoring docked ligand conformations using free energy correlations.
Spyrakis F; Amadasi A; Fornabaio M; Abraham DJ; Mozzarelli A; Kellogg GE; Cozzini P
Eur J Med Chem; 2007 Jul; 42(7):921-33. PubMed ID: 17346861
[TBL] [Abstract][Full Text] [Related]
11. Detecting DNA mismatches with metallo-insertors: a molecular simulation study.
Vargiu AV; Magistrato A
Inorg Chem; 2012 Feb; 51(4):2046-57. PubMed ID: 22288501
[TBL] [Abstract][Full Text] [Related]
12. Importance of molecular computer modeling in anticancer drug development.
Geromichalos GD
J BUON; 2007 Sep; 12 Suppl 1():S101-18. PubMed ID: 17935268
[TBL] [Abstract][Full Text] [Related]
13. pso@autodock: a fast flexible molecular docking program based on Swarm intelligence.
Namasivayam V; Günther R
Chem Biol Drug Des; 2007 Dec; 70(6):475-84. PubMed ID: 17986206
[TBL] [Abstract][Full Text] [Related]
14. Comparison of computational methods to model DNA minor groove binders.
Srivastava HK; Chourasia M; Kumar D; Sastry GN
J Chem Inf Model; 2011 Mar; 51(3):558-71. PubMed ID: 21375336
[TBL] [Abstract][Full Text] [Related]
15. Conformation and dynamics of drug-DNA intercalation.
Herzyk P; Neidle S; Goodfellow JM
J Biomol Struct Dyn; 1992 Aug; 10(1):97-139. PubMed ID: 1418749
[TBL] [Abstract][Full Text] [Related]
16. Acenaphtho[1,2-b]pyrrole derivatives as new family of intercalators: various DNA binding geometry and interesting antitumor capacity.
Zhang Z; Yang Y; Zhang D; Wang Y; Qian X; Liu F
Bioorg Med Chem; 2006 Oct; 14(20):6962-70. PubMed ID: 16828559
[TBL] [Abstract][Full Text] [Related]
17. Differential DNA recognition by the enantiomers of 1-Rh(MGP)2 phi: a combination of shape selection and direct readout.
Franklin SJ; Barton JK
Biochemistry; 1998 Nov; 37(46):16093-105. PubMed ID: 9819202
[TBL] [Abstract][Full Text] [Related]
18. [DNA intercalators: their interaction with DNA and other cell components and their use in biological research].
Faddeeva MD; Beliaeva TN
Tsitologiia; 1991; 33(10):3-31. PubMed ID: 1814033
[TBL] [Abstract][Full Text] [Related]
19. A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics.
Soni A; Khurana P; Singh T; Jayaram B
Bioinformatics; 2017 May; 33(10):1488-1496. PubMed ID: 28073762
[TBL] [Abstract][Full Text] [Related]
20. Binding of a macrocyclic bisacridine and ametantrone to CGTACG involves similar unusual intercalation platforms.
Yang XL; Robinson H; Gao YG; Wang AH
Biochemistry; 2000 Sep; 39(36):10950-7. PubMed ID: 10998231
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
