These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
227 related articles for article (PubMed ID: 24336806)
1. NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks. Hu J; Kehr B; Reinert K Bioinformatics; 2014 Feb; 30(4):540-8. PubMed ID: 24336806 [TBL] [Abstract][Full Text] [Related]
2. LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks. Hu J; Reinert K Bioinformatics; 2015 Feb; 31(3):363-72. PubMed ID: 25282642 [TBL] [Abstract][Full Text] [Related]
3. A novel algorithm for alignment of multiple PPI networks based on simulated annealing. Hu J; He J; Li J; Gao Y; Zheng Y; Shang X BMC Genomics; 2019 Dec; 20(Suppl 13):932. PubMed ID: 31881842 [TBL] [Abstract][Full Text] [Related]
4. A Novel Computational Approach for Global Alignment for Multiple Biological Networks. Djeddi WE; Yahia SB; Nguifo EM IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(6):2060-2066. PubMed ID: 29994444 [TBL] [Abstract][Full Text] [Related]
5. A multiobjective memetic algorithm for PPI network alignment. Clark C; Kalita J Bioinformatics; 2015 Jun; 31(12):1988-98. PubMed ID: 25667548 [TBL] [Abstract][Full Text] [Related]
6. INDEX: Incremental depth extension approach for protein-protein interaction networks alignment. Mir A; Naghibzadeh M; Saadati N Biosystems; 2017 Dec; 162():24-34. PubMed ID: 28860070 [TBL] [Abstract][Full Text] [Related]
7. IsoRankN: spectral methods for global alignment of multiple protein networks. Liao CS; Lu K; Baym M; Singh R; Berger B Bioinformatics; 2009 Jun; 25(12):i253-8. PubMed ID: 19477996 [TBL] [Abstract][Full Text] [Related]
8. Fuse: multiple network alignment via data fusion. Gligorijević V; Malod-Dognin N; Pržulj N Bioinformatics; 2016 Apr; 32(8):1195-203. PubMed ID: 26668003 [TBL] [Abstract][Full Text] [Related]
9. WebNetCoffee: a web-based application to identify functionally conserved proteins from Multiple PPI networks. Hu J; Gao Y; He J; Zheng Y; Shang X BMC Bioinformatics; 2018 Nov; 19(1):422. PubMed ID: 30419809 [TBL] [Abstract][Full Text] [Related]
10. MAGNA: Maximizing Accuracy in Global Network Alignment. Saraph V; Milenković T Bioinformatics; 2014 Oct; 30(20):2931-40. PubMed ID: 25015987 [TBL] [Abstract][Full Text] [Related]
12. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks. Alkan F; Erten C Bioinformatics; 2015 Jul; 31(14):2356-63. PubMed ID: 25788620 [TBL] [Abstract][Full Text] [Related]
13. Functionally guided alignment of protein interaction networks for module detection. Ali W; Deane CM Bioinformatics; 2009 Dec; 25(23):3166-73. PubMed ID: 19797409 [TBL] [Abstract][Full Text] [Related]
14. BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks. Alkan F; Erten C Bioinformatics; 2014 Feb; 30(4):531-9. PubMed ID: 24336414 [TBL] [Abstract][Full Text] [Related]
16. Domain-oriented edge-based alignment of protein interaction networks. Guo X; Hartemink AJ Bioinformatics; 2009 Jun; 25(12):i240-6. PubMed ID: 19477994 [TBL] [Abstract][Full Text] [Related]
17. Node Handprinting: A Scalable and Accurate Algorithm for Aligning Multiple Biological Networks. Radu A; Charleston M J Comput Biol; 2015 Jul; 22(7):687-97. PubMed ID: 25695597 [TBL] [Abstract][Full Text] [Related]
18. NETAL: a new graph-based method for global alignment of protein-protein interaction networks. Neyshabur B; Khadem A; Hashemifar S; Arab SS Bioinformatics; 2013 Jul; 29(13):1654-62. PubMed ID: 23696650 [TBL] [Abstract][Full Text] [Related]
19. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks. Memišević V; Pržulj N Integr Biol (Camb); 2012 Jul; 4(7):734-43. PubMed ID: 22234340 [TBL] [Abstract][Full Text] [Related]
20. Survey of local and global biological network alignment: the need to reconcile the two sides of the same coin. Guzzi PH; Milenkovic T Brief Bioinform; 2018 May; 19(3):472-481. PubMed ID: 28062413 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]