BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

255 related articles for article (PubMed ID: 24363631)

  • 1. Flow cytometry bioinformatics.
    O'Neill K; Aghaeepour N; Spidlen J; Brinkman R
    PLoS Comput Biol; 2013; 9(12):e1003365. PubMed ID: 24363631
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) compliant manuscript using the International Society for Advancement of Cytometry (ISAC) FCS file repository (FlowRepository.org).
    Spidlen J; Breuer K; Brinkman R
    Curr Protoc Cytom; 2012 Jul; Chapter 10():Unit 10.18. PubMed ID: 22752950
    [TBL] [Abstract][Full Text] [Related]  

  • 3. CytoML for cross-platform cytometry data sharing.
    Finak G; Jiang W; Gottardo R
    Cytometry A; 2018 Dec; 93(12):1189-1196. PubMed ID: 30551257
    [TBL] [Abstract][Full Text] [Related]  

  • 4. GenePattern flow cytometry suite.
    Spidlen J; Barsky A; Breuer K; Carr P; Nazaire MD; Hill BA; Qian Y; Liefeld T; Reich M; Mesirov JP; Wilkinson P; Scheuermann RH; Sekaly RP; Brinkman RR
    Source Code Biol Med; 2013 Jul; 8(1):14. PubMed ID: 23822732
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Flow cytometry data standards.
    Spidlen J; Shooshtari P; Kollmann TR; Brinkman RR
    BMC Res Notes; 2011 Mar; 4():50. PubMed ID: 21385382
    [TBL] [Abstract][Full Text] [Related]  

  • 6. flowDensity: reproducing manual gating of flow cytometry data by automated density-based cell population identification.
    Malek M; Taghiyar MJ; Chong L; Finak G; Gottardo R; Brinkman RR
    Bioinformatics; 2015 Feb; 31(4):606-7. PubMed ID: 25378466
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ISAC's Gating-ML 2.0 data exchange standard for gating description.
    Spidlen J; Moore W; ; Brinkman RR
    Cytometry A; 2015 Jul; 87(7):683-7. PubMed ID: 25976062
    [TBL] [Abstract][Full Text] [Related]  

  • 8. flowIO: Flow cytometry standard conformance testing, editing, and export tool.
    Koblížek M; Lebedeva A; Fišer K
    Cytometry A; 2018 Aug; 93(8):848-853. PubMed ID: 30110138
    [TBL] [Abstract][Full Text] [Related]  

  • 9. MIFlowCyt: the minimum information about a Flow Cytometry Experiment.
    Lee JA; Spidlen J; Boyce K; Cai J; Crosbie N; Dalphin M; Furlong J; Gasparetto M; Goldberg M; Goralczyk EM; Hyun B; Jansen K; Kollmann T; Kong M; Leif R; McWeeney S; Moloshok TD; Moore W; Nolan G; Nolan J; Nikolich-Zugich J; Parrish D; Purcell B; Qian Y; Selvaraj B; Smith C; Tchuvatkina O; Wertheimer A; Wilkinson P; Wilson C; Wood J; Zigon R; ; Scheuermann RH; Brinkman RR
    Cytometry A; 2008 Oct; 73(10):926-30. PubMed ID: 18752282
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Comparison of clustering methods for high-dimensional single-cell flow and mass cytometry data.
    Weber LM; Robinson MD
    Cytometry A; 2016 Dec; 89(12):1084-1096. PubMed ID: 27992111
    [TBL] [Abstract][Full Text] [Related]  

  • 11. FuGEFlow: data model and markup language for flow cytometry.
    Qian Y; Tchuvatkina O; Spidlen J; Wilkinson P; Gasparetto M; Jones AR; Manion FJ; Scheuermann RH; Sekaly RP; Brinkman RR
    BMC Bioinformatics; 2009 Jun; 10():184. PubMed ID: 19531228
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Gating-ML: XML-based gating descriptions in flow cytometry.
    Spidlen J; Leif RC; Moore W; Roederer M; ; Brinkman RR
    Cytometry A; 2008 Dec; 73A(12):1151-7. PubMed ID: 18773465
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.
    Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P
    Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Basics of flow cytometry.
    Radcliff G; Jaroszeski MJ
    Methods Mol Biol; 1998; 91():1-24. PubMed ID: 9664477
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Optimizing transformations for automated, high throughput analysis of flow cytometry data.
    Finak G; Perez JM; Weng A; Gottardo R
    BMC Bioinformatics; 2010 Nov; 11():546. PubMed ID: 21050468
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Reverse-engineering flow-cytometry gating strategies for phenotypic labelling and high-performance cell sorting.
    Becht E; Simoni Y; Coustan-Smith E; Evrard M; Cheng Y; Ng LG; Campana D; Newell EW
    Bioinformatics; 2019 Jan; 35(2):301-308. PubMed ID: 29931307
    [TBL] [Abstract][Full Text] [Related]  

  • 17. optimalFlow: optimal transport approach to flow cytometry gating and population matching.
    Del Barrio E; Inouzhe H; Loubes JM; Matrán C; Mayo-Íscar A
    BMC Bioinformatics; 2020 Oct; 21(1):479. PubMed ID: 33109072
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Gating mass cytometry data by deep learning.
    Li H; Shaham U; Stanton KP; Yao Y; Montgomery RR; Kluger Y
    Bioinformatics; 2017 Nov; 33(21):3423-3430. PubMed ID: 29036374
    [TBL] [Abstract][Full Text] [Related]  

  • 19. QUAliFiER: an automated pipeline for quality assessment of gated flow cytometry data.
    Finak G; Jiang W; Pardo J; Asare A; Gottardo R
    BMC Bioinformatics; 2012 Sep; 13():252. PubMed ID: 23020243
    [TBL] [Abstract][Full Text] [Related]  

  • 20. CytoPipeline and CytoPipelineGUI: a Bioconductor R package suite for building and visualizing automated pre-processing pipelines for flow cytometry data.
    Hauchamps P; Bayat B; Delandre S; Hamrouni M; Toussaint M; Temmerman S; Lin D; Gatto L
    BMC Bioinformatics; 2024 Feb; 25(1):80. PubMed ID: 38378440
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.