214 related articles for article (PubMed ID: 24379827)
21. Gene essentiality in cancer is better predicted by mRNA abundance than by gene regulatory network-inferred activity.
Tudose C; Bond J; Ryan CJ
NAR Cancer; 2023 Dec; 5(4):zcad056. PubMed ID: 38035131
[TBL] [Abstract][Full Text] [Related]
22. AGRN: accurate gene regulatory network inference using ensemble machine learning methods.
Alawad DM; Katebi A; Kabir MWU; Hoque MT
Bioinform Adv; 2023; 3(1):vbad032. PubMed ID: 37038446
[TBL] [Abstract][Full Text] [Related]
23. Gene regulatory network inference in the era of single-cell multi-omics.
Badia-I-Mompel P; Wessels L; Müller-Dott S; Trimbour R; Ramirez Flores RO; Argelaguet R; Saez-Rodriguez J
Nat Rev Genet; 2023 Nov; 24(11):739-754. PubMed ID: 37365273
[TBL] [Abstract][Full Text] [Related]
24. Gene regulatory networks and their applications: understanding biological and medical problems in terms of networks.
Emmert-Streib F; Dehmer M; Haibe-Kains B
Front Cell Dev Biol; 2014; 2():38. PubMed ID: 25364745
[TBL] [Abstract][Full Text] [Related]
25. Information theoretic approaches for inference of biological networks from continuous-valued data.
Budden DM; Crampin EJ
BMC Syst Biol; 2016 Sep; 10(1):89. PubMed ID: 27599566
[TBL] [Abstract][Full Text] [Related]
26. Computational prediction of gene regulatory networks in plant growth and development.
Haque S; Ahmad JS; Clark NM; Williams CM; Sozzani R
Curr Opin Plant Biol; 2019 Feb; 47():96-105. PubMed ID: 30445315
[TBL] [Abstract][Full Text] [Related]
27. [Study of Algorithms Reconstructing Gene Regulatory Network with Resampling and Conditional Mutual Information].
Liu F
Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2016 Oct; 33(5):985-90. PubMed ID: 29714955
[TBL] [Abstract][Full Text] [Related]
28. Optimal design of gene knockout experiments for gene regulatory network inference.
Ud-Dean SM; Gunawan R
Bioinformatics; 2016 Mar; 32(6):875-83. PubMed ID: 26568633
[TBL] [Abstract][Full Text] [Related]
29. Revealing differences in gene network inference algorithms on the network level by ensemble methods.
Altay G; Emmert-Streib F
Bioinformatics; 2010 Jul; 26(14):1738-44. PubMed ID: 20501553
[TBL] [Abstract][Full Text] [Related]
30. Uncovering cancer gene regulation by accurate regulatory network inference from uninformative data.
Seçilmiş D; Hillerton T; Morgan D; Tjärnberg A; Nelander S; Nordling TEM; Sonnhammer ELL
NPJ Syst Biol Appl; 2020 Nov; 6(1):37. PubMed ID: 33168813
[TBL] [Abstract][Full Text] [Related]
31. Inferring Genome-Wide Interaction Networks.
Altay G; Mendi O
Methods Mol Biol; 2017; 1526():99-117. PubMed ID: 27896738
[TBL] [Abstract][Full Text] [Related]
32. scGRN: a comprehensive single-cell gene regulatory network platform of human and mouse.
Huang X; Song C; Zhang G; Li Y; Zhao Y; Zhang Q; Zhang Y; Fan S; Zhao J; Xie L; Li C
Nucleic Acids Res; 2024 Jan; 52(D1):D293-D303. PubMed ID: 37889053
[TBL] [Abstract][Full Text] [Related]
33. Reverse engineering module networks by PSO-RNN hybrid modeling.
Zhang Y; Xuan J; de los Reyes BG; Clarke R; Ressom HW
BMC Genomics; 2009 Jul; 10 Suppl 1(Suppl 1):S15. PubMed ID: 19594874
[TBL] [Abstract][Full Text] [Related]
34. Anomaly detection in gene expression via stochastic models of gene regulatory networks.
Kim H; Gelenbe E
BMC Genomics; 2009 Dec; 10 Suppl 3(Suppl 3):S26. PubMed ID: 19958490
[TBL] [Abstract][Full Text] [Related]
35. Network component analysis provides quantitative insights on an Arabidopsis transcription factor-gene regulatory network.
Misra A; Sriram G
BMC Syst Biol; 2013 Nov; 7():126. PubMed ID: 24228871
[TBL] [Abstract][Full Text] [Related]
36. MetaSEM: Gene Regulatory Network Inference from Single-Cell RNA Data by Meta-Learning.
Zhang Y; Wang M; Wang Z; Liu Y; Xiong S; Zou Q
Int J Mol Sci; 2023 Jan; 24(3):. PubMed ID: 36768917
[TBL] [Abstract][Full Text] [Related]
37. Time lagged information theoretic approaches to the reverse engineering of gene regulatory networks.
Chaitankar V; Ghosh P; Perkins EJ; Gong P; Zhang C
BMC Bioinformatics; 2010 Oct; 11 Suppl 6(Suppl 6):S19. PubMed ID: 20946602
[TBL] [Abstract][Full Text] [Related]
38. Reconstruction of a gene regulatory network of the induced systemic resistance defense response in Arabidopsis using boolean networks.
Timmermann T; González B; Ruz GA
BMC Bioinformatics; 2020 Apr; 21(1):142. PubMed ID: 32293239
[TBL] [Abstract][Full Text] [Related]
39. Optimal Sparsity Selection Based on an Information Criterion for Accurate Gene Regulatory Network Inference.
Seçilmiş D; Nelander S; Sonnhammer ELL
Front Genet; 2022; 13():855770. PubMed ID: 35923701
[TBL] [Abstract][Full Text] [Related]
40. Probabilistic inference and ranking of gene regulatory pathways as a shortest-path problem.
Jensen JD; Jensen DM; Clement MJ; Snell QO
BMC Bioinformatics; 2013; 14 Suppl 13(Suppl 13):S5. PubMed ID: 24266986
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]