BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

205 related articles for article (PubMed ID: 24407300)

  • 1. Maximum likelihood inference of the evolutionary history of a PPI network from the duplication history of its proteins.
    Li S; Choi KP; Wu T; Zhang L
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(6):1412-21. PubMed ID: 24407300
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A methodology for detecting the orthology signal in a PPI network at a functional complex level.
    Jancura P; Mavridou E; Carrillo-de Santa Pau E; Marchiori E
    BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S18. PubMed ID: 22759423
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Pairwise alignment of protein interaction networks.
    Koyutürk M; Kim Y; Topkara U; Subramaniam S; Szpankowski W; Grama A
    J Comput Biol; 2006 Mar; 13(2):182-99. PubMed ID: 16597234
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Network archaeology: uncovering ancient networks from present-day interactions.
    Navlakha S; Kingsford C
    PLoS Comput Biol; 2011 Apr; 7(4):e1001119. PubMed ID: 21533211
    [TBL] [Abstract][Full Text] [Related]  

  • 5. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J; Song B; Hu X; Yan F; Wang J
    BMC Bioinformatics; 2018 Aug; 19(Suppl 9):286. PubMed ID: 30367584
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Global alignment of protein-protein interaction networks.
    Mongiovì M; Sharan R
    Methods Mol Biol; 2013; 939():21-34. PubMed ID: 23192538
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Network simulation reveals significant contribution of network motifs to the age-dependency of yeast protein-protein interaction networks.
    Liang C; Luo J; Song D
    Mol Biosyst; 2014 Jul; 10(9):2277-88. PubMed ID: 24964354
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Evolutionary Model Selection and Parameter Estimation for Protein-Protein Interaction Network Based on Differential Evolution Algorithm.
    Huang L; Liao L; Wu CH
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(3):622-31. PubMed ID: 26357273
    [TBL] [Abstract][Full Text] [Related]  

  • 9. k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.
    Liu Q; Chen YP; Li J
    J Theor Biol; 2014 Jan; 340():146-54. PubMed ID: 24056214
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Protein interaction networks of Saccharomyces cerevisiae, Caenorhabditis elegans and Drosophila melanogaster: large-scale organization and robustness.
    Li D; Li J; Ouyang S; Wang J; Wu S; Wan P; Zhu Y; Xu X; He F
    Proteomics; 2006 Jan; 6(2):456-61. PubMed ID: 16317777
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks.
    Wang Y; Jeong H; Yoon BJ; Qian X
    BMC Genomics; 2020 Nov; 21(Suppl 10):615. PubMed ID: 33208103
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MOEPGA: A novel method to detect protein complexes in yeast protein-protein interaction networks based on MultiObjective Evolutionary Programming Genetic Algorithm.
    Cao B; Luo J; Liang C; Wang S; Song D
    Comput Biol Chem; 2015 Oct; 58():173-81. PubMed ID: 26298638
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Evolutionary analysis and interaction prediction for protein-protein interaction network in geometric space.
    Huang L; Liao L; Wu CH
    PLoS One; 2017; 12(9):e0183495. PubMed ID: 28886027
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Geometric evolutionary dynamics of protein interaction networks.
    Przulj N; Kuchaiev O; Stevanović A; Hayes W
    Pac Symp Biocomput; 2010; ():178-89. PubMed ID: 19908370
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Evolutionary Graph Clustering for Protein Complex Identification.
    He T; Chan KCC
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(3):892-904. PubMed ID: 28029628
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Global Biological Network Alignment by Using Efficient Memetic Algorithm.
    Maoguo Gong ; Zhenglin Peng ; Lijia Ma ; Jiaxiang Huang
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov; 13(6):1117-1129. PubMed ID: 28055895
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K; Pavlopoulou N; Papasavvas C; Likothanassis S; Dimitrakopoulos C; Georgopoulos E; Moschopoulos C; Mavroudi S
    Artif Intell Med; 2015 Mar; 63(3):181-9. PubMed ID: 25765008
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Detecting protein complexes in a PPI network: a gene ontology based multi-objective evolutionary approach.
    Mukhopadhyay A; Ray S; De M
    Mol Biosyst; 2012 Nov; 8(11):3036-48. PubMed ID: 22990765
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A linear-time algorithm for predicting functional annotations from PPI networks.
    Wu Y; Lonardi S
    J Bioinform Comput Biol; 2008 Dec; 6(6):1049-65. PubMed ID: 19090017
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Detecting Protein Complexes Based on Uncertain Graph Model.
    Zhao B; Wang J; Li M; Wu FX; Pan Y
    IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(3):486-97. PubMed ID: 26356017
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.