These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
502 related articles for article (PubMed ID: 2441069)
21. Activated conformations of the ras-gene-encoded p21 protein. 1. An energy-refined structure for the normal p21 protein complexed with GDP. Dykes DC; Brandt-Rauf P; Luster SM; Chung D; Friedman FK; Pincus MR J Biomol Struct Dyn; 1992 Jun; 9(6):1025-44. PubMed ID: 1637501 [TBL] [Abstract][Full Text] [Related]
22. Periplasmic binding protein structure and function. Refined X-ray structures of the leucine/isoleucine/valine-binding protein and its complex with leucine. Sack JS; Saper MA; Quiocho FA J Mol Biol; 1989 Mar; 206(1):171-91. PubMed ID: 2649682 [TBL] [Abstract][Full Text] [Related]
23. Database algorithm for generating protein backbone and side-chain co-ordinates from a C alpha trace application to model building and detection of co-ordinate errors. Holm L; Sander C J Mol Biol; 1991 Mar; 218(1):183-94. PubMed ID: 2002501 [TBL] [Abstract][Full Text] [Related]
24. Statistically based reduced representation of amino acid side chains. Rainey JK; Goh MC J Chem Inf Comput Sci; 2004; 44(3):817-30. PubMed ID: 15154746 [TBL] [Abstract][Full Text] [Related]
25. Packing as a structural basis of protein stability: understanding mutant properties from wildtype structure. Lee C; Levitt M Pac Symp Biocomput; 1997; ():245-55. PubMed ID: 9390296 [TBL] [Abstract][Full Text] [Related]
26. SDRL: a sequence-dependent protein side-chain rotamer library. Taghizadeh M; Goliaei B; Madadkar-Sobhani A Mol Biosyst; 2015 Jul; 11(7):2000-7. PubMed ID: 25953624 [TBL] [Abstract][Full Text] [Related]
27. High-resolution solution structure of reduced French bean plastocyanin and comparison with the crystal structure of poplar plastocyanin. Moore JM; Lepre CA; Gippert GP; Chazin WJ; Case DA; Wright PE J Mol Biol; 1991 Sep; 221(2):533-55. PubMed ID: 1920431 [TBL] [Abstract][Full Text] [Related]
28. How similar must a template protein be for homology modeling by side-chain packing methods? Chung SY; Subbiah S Pac Symp Biocomput; 1996; ():126-41. PubMed ID: 9390228 [TBL] [Abstract][Full Text] [Related]
29. Packing in protein cores. Gaines JC; Clark AH; Regan L; O'Hern CS J Phys Condens Matter; 2017 Jul; 29(29):293001. PubMed ID: 28557791 [TBL] [Abstract][Full Text] [Related]
30. Comparative molecular model building of two serine proteinases from cytotoxic T lymphocytes. Murphy ME; Moult J; Bleackley RC; Gershenfeld H; Weissman IL; James MN Proteins; 1988; 4(3):190-204. PubMed ID: 3237717 [TBL] [Abstract][Full Text] [Related]
31. The Dynameomics rotamer library: amino acid side chain conformations and dynamics from comprehensive molecular dynamics simulations in water. Scouras AD; Daggett V Protein Sci; 2011 Feb; 20(2):341-52. PubMed ID: 21280126 [TBL] [Abstract][Full Text] [Related]
32. Refinement of the crystal structure of wheat germ agglutinin isolectin 2 at 1.8 A resolution. Wright CS J Mol Biol; 1987 Apr; 194(3):501-29. PubMed ID: 3625772 [TBL] [Abstract][Full Text] [Related]
33. The jigsaw puzzle model: search for conformational specificity in protein interiors. Banerjee R; Sen M; Bhattacharya D; Saha P J Mol Biol; 2003 Oct; 333(1):211-26. PubMed ID: 14516754 [TBL] [Abstract][Full Text] [Related]
34. IRECS: a new algorithm for the selection of most probable ensembles of side-chain conformations in protein models. Hartmann C; Antes I; Lengauer T Protein Sci; 2007 Jul; 16(7):1294-307. PubMed ID: 17567749 [TBL] [Abstract][Full Text] [Related]
35. X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus. Day MW; Hsu BT; Joshua-Tor L; Park JB; Zhou ZH; Adams MW; Rees DC Protein Sci; 1992 Nov; 1(11):1494-507. PubMed ID: 1303768 [TBL] [Abstract][Full Text] [Related]
36. Analysis of side-chain rotamers in transmembrane proteins. Chamberlain AK; Bowie JU Biophys J; 2004 Nov; 87(5):3460-9. PubMed ID: 15339811 [TBL] [Abstract][Full Text] [Related]
37. Molprobity's ultimate rotamer-library distributions for model validation. Hintze BJ; Lewis SM; Richardson JS; Richardson DC Proteins; 2016 Sep; 84(9):1177-89. PubMed ID: 27018641 [TBL] [Abstract][Full Text] [Related]
38. Prediction of protein side-chain conformation by packing optimization. Lee C; Subbiah S J Mol Biol; 1991 Jan; 217(2):373-88. PubMed ID: 1992168 [TBL] [Abstract][Full Text] [Related]
39. Prediction of protein side-chain rotamers from a backbone-dependent rotamer library: a new homology modeling tool. Bower MJ; Cohen FE; Dunbrack RL J Mol Biol; 1997 Apr; 267(5):1268-82. PubMed ID: 9150411 [TBL] [Abstract][Full Text] [Related]
40. Beyond the rotamer library: genetic algorithm combined with the disturbing mutation process for upbuilding protein side-chains. Liu Z; Jiang L; Gao Y; Liang S; Chen H; Han Y; Lai L Proteins; 2003 Jan; 50(1):49-62. PubMed ID: 12471599 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]