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5. Efficient haplotype matching between a query and a panel for genealogical search. Naseri A; Holzhauser E; Zhi D; Zhang S Bioinformatics; 2019 Jul; 35(14):i233-i241. PubMed ID: 31510689 [TBL] [Abstract][Full Text] [Related]
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9. Ψ-RA: a parallel sparse index for genomic read alignment. Oğuzhan Külekci M; Hon WK; Shah R; Scott Vitter J; Xu B BMC Genomics; 2011; 12 Suppl 2(Suppl 2):S7. PubMed ID: 21989248 [TBL] [Abstract][Full Text] [Related]
10. Parallel and Space-Efficient Construction of Burrows-Wheeler Transform and Suffix Array for Big Genome Data. Liu Y; Hankeln T; Schmidt B IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(3):592-8. PubMed ID: 27295644 [TBL] [Abstract][Full Text] [Related]
11. Exploiting parallelization in positional Burrows-Wheeler transform (PBWT) algorithms for efficient haplotype matching and compression. Wertenbroek R; Xenarios I; Thoma Y; Delaneau O Bioinform Adv; 2023; 3(1):vbad021. PubMed ID: 36908398 [TBL] [Abstract][Full Text] [Related]
12. A graph extension of the positional Burrows-Wheeler transform and its applications. Novak AM; Garrison E; Paten B Algorithms Mol Biol; 2017; 12():18. PubMed ID: 28702075 [TBL] [Abstract][Full Text] [Related]
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14. Data Structures for SMEM-Finding in the PBWT. Bonizzoni P; Boucher C; Cozzi D; Gagie T; Köppl D; Rossi M Int Symp String Process Inf Retr; 2023 Sep; 14240():89-101. PubMed ID: 39149146 [TBL] [Abstract][Full Text] [Related]
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18. Efficient Construction of a Complete Index for Pan-Genomics Read Alignment. Kuhnle A; Mun T; Boucher C; Gagie T; Langmead B; Manzini G J Comput Biol; 2020 Apr; 27(4):500-513. PubMed ID: 32181684 [No Abstract] [Full Text] [Related]
19. Graphical pan-genome analysis with compressed suffix trees and the Burrows-Wheeler transform. Baier U; Beller T; Ohlebusch E Bioinformatics; 2016 Feb; 32(4):497-504. PubMed ID: 26504144 [TBL] [Abstract][Full Text] [Related]
20. Minimal Positional Substring Cover: A Haplotype Threading Alternative to Li & Stephens Model. Sanaullah A; Zhi D; Zhang S bioRxiv; 2023 Jan; ():. PubMed ID: 36711469 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]