190 related articles for article (PubMed ID: 24422528)
1. Design and synthesis of heterocyclic cations for specific DNA recognition: from AT-rich to mixed-base-pair DNA sequences.
Chai Y; Paul A; Rettig M; Wilson WD; Boykin DW
J Org Chem; 2014 Feb; 79(3):852-66. PubMed ID: 24422528
[TBL] [Abstract][Full Text] [Related]
2. A New Generation of Minor-Groove-Binding-Heterocyclic Diamidines That Recognize G·C Base Pairs in an AT Sequence Context.
Paul A; Guo P; Boykin DW; Wilson WD
Molecules; 2019 Mar; 24(5):. PubMed ID: 30866557
[TBL] [Abstract][Full Text] [Related]
3. Design of DNA minor groove binding diamidines that recognize GC base pair sequences: a dimeric-hinge interaction motif.
Munde M; Ismail MA; Arafa R; Peixoto P; Collar CJ; Liu Y; Hu L; David-Cordonnier MH; Lansiaux A; Bailly C; Boykin DW; Wilson WD
J Am Chem Soc; 2007 Nov; 129(44):13732-43. PubMed ID: 17935330
[TBL] [Abstract][Full Text] [Related]
4. First Structure of a Designed Minor Groove Binding Heterocyclic Cation that Specifically Recognizes Mixed DNA Base Pair Sequences.
Harika NK; Germann MW; Wilson WD
Chemistry; 2017 Dec; 23(69):17612-17620. PubMed ID: 29044822
[TBL] [Abstract][Full Text] [Related]
5. Minor groove binding compounds that jump a gc base pair and bind to adjacent AT base pair sites.
Rahimian M; Kumar A; Say M; Bakunov SA; Boykin DW; Tidwell RR; Wilson WD
Biochemistry; 2009 Feb; 48(7):1573-83. PubMed ID: 19173620
[TBL] [Abstract][Full Text] [Related]
6. Binding to the DNA minor groove by heterocyclic dications: from AT-specific monomers to GC recognition with dimers.
Nanjunda R; Wilson WD
Curr Protoc Nucleic Acid Chem; 2012 Dec; Chapter 8():Unit8.8. PubMed ID: 23255206
[TBL] [Abstract][Full Text] [Related]
7. Mixed up minor groove binders: Convincing A·T specific compounds to recognize a G·C base pair.
Paul A; Nanjunda R; Kumar A; Laughlin S; Nhili R; Depauw S; Deuser SS; Chai Y; Chaudhary AS; David-Cordonnier MH; Boykin DW; Wilson WD
Bioorg Med Chem Lett; 2015 Nov; 25(21):4927-4932. PubMed ID: 26051649
[TBL] [Abstract][Full Text] [Related]
8. DNA minor groove induced dimerization of heterocyclic cations: compound structure, binding affinity, and specificity for a TTAA site.
Munde M; Kumar A; Nhili R; Depauw S; David-Cordonnier MH; Ismail MA; Stephens CE; Farahat AA; Batista-Parra A; Boykin DW; Wilson WD
J Mol Biol; 2010 Oct; 402(5):847-64. PubMed ID: 20713062
[TBL] [Abstract][Full Text] [Related]
9. Evaluation of the influence of compound structure on stacked-dimer formation in the DNA minor groove.
Wang L; Carrasco C; Kumar A; Stephens CE; Bailly C; Boykin DW; Wilson WD
Biochemistry; 2001 Feb; 40(8):2511-21. PubMed ID: 11327873
[TBL] [Abstract][Full Text] [Related]
10. Binding to the DNA Minor Groove by Heterocyclic Dications: from AT Specific to GC Recognition Compounds.
Paul A; Nanjunda R; Wilson WD
Curr Protoc; 2023 Apr; 3(4):e729. PubMed ID: 37071034
[TBL] [Abstract][Full Text] [Related]
11. Imino proton NMR guides the reprogramming of A•T specific minor groove binders for mixed base pair recognition.
Harika NK; Paul A; Stroeva E; Chai Y; Boykin DW; Germann MW; Wilson WD
Nucleic Acids Res; 2016 Jun; 44(10):4519-27. PubMed ID: 27131382
[TBL] [Abstract][Full Text] [Related]
12. Recognition of ATGA sequences by the unfused aromatic dication DB293 forming stacked dimers in the DNA minor groove.
Bailly C; Tardy C; Wang L; Armitage B; Hopkins K; Kumar A; Schuster GB; Boykin DW; Wilson WD
Biochemistry; 2001 Aug; 40(33):9770-9. PubMed ID: 11502170
[TBL] [Abstract][Full Text] [Related]
13. Small Sequence-Sensitive Compounds for Specific Recognition of the G⋅C Base Pair in DNA Minor Groove.
Farahat AA; Guo P; Shoeib H; Paul A; Boykin DW; Wilson WD
Chemistry; 2020 Apr; 26(20):4539-4551. PubMed ID: 31884714
[TBL] [Abstract][Full Text] [Related]
14. Compound Shape Effects in Minor Groove Binding Affinity and Specificity for Mixed Sequence DNA.
Guo P; Farahat AA; Paul A; Harika NK; Boykin DW; Wilson WD
J Am Chem Soc; 2018 Nov; 140(44):14761-14769. PubMed ID: 30353731
[TBL] [Abstract][Full Text] [Related]
15. Resolution of mixed site DNA complexes with dimer-forming minor-groove binders by using electrospray ionization mass spectrometry: compound structure and DNA sequence effects.
Laughlin S; Wang S; Kumar A; Farahat AA; Boykin DW; Wilson WD
Chemistry; 2015 Mar; 21(14):5528-39. PubMed ID: 25703690
[TBL] [Abstract][Full Text] [Related]
16. Heterocyclic diamidine interactions at AT base pairs in the DNA minor groove: effects of heterocycle differences, DNA AT sequence and length.
Liu Y; Collar CJ; Kumar A; Stephens CE; Boykin DW; Wilson WD
J Phys Chem B; 2008 Sep; 112(37):11809-18. PubMed ID: 18717551
[TBL] [Abstract][Full Text] [Related]
17. Systematic synthetic and biophysical development of mixed sequence DNA binding agents.
Paul A; Kumar A; Nanjunda R; Farahat AA; Boykin DW; Wilson WD
Org Biomol Chem; 2017 Jan; 15(4):827-835. PubMed ID: 27995240
[TBL] [Abstract][Full Text] [Related]
18. DNA recognition: design, synthesis and biophysical characteristics of pyrrole(H) based polyamides.
Chavda S; Mulder K; Brown T; Mackay H; Babu B; Westrate L; Ferguson A; Lin S; Kiakos K; Ramos JP; Munde M; Wilson WD; Hartley JA; Lee M
Med Chem; 2010 May; 6(3):150-8. PubMed ID: 20632976
[TBL] [Abstract][Full Text] [Related]
19. The Thiophene "Sigma-Hole" as a Concept for Preorganized, Specific Recognition of G⋅C Base Pairs in the DNA Minor Groove.
Guo P; Paul A; Kumar A; Farahat AA; Kumar D; Wang S; Boykin DW; Wilson WD
Chemistry; 2016 Oct; 22(43):15404-15412. PubMed ID: 27624927
[TBL] [Abstract][Full Text] [Related]
20. Induced fit conformational changes of a "reversed amidine" heterocycle: optimized interactions in a DNA minor groove complex.
Munde M; Lee M; Neidle S; Arafa R; Boykin DW; Liu Y; Bailly C; Wilson WD
J Am Chem Soc; 2007 May; 129(17):5688-98. PubMed ID: 17425312
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
