These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

313 related articles for article (PubMed ID: 24446359)

  • 1. Generalized spring tensor models for protein fluctuation dynamics and conformation changes.
    Na H; Lin TL; Song G
    Adv Exp Med Biol; 2014; 805():107-35. PubMed ID: 24446359
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Generalized spring tensor models for protein fluctuation dynamics and conformation changes.
    Lin TL; Song G
    BMC Struct Biol; 2010 May; 10 Suppl 1(Suppl 1):S3. PubMed ID: 20487510
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A natural unification of GNM and ANM and the role of inter-residue forces.
    Na H; Song G
    Phys Biol; 2014 Jun; 11(3):036002. PubMed ID: 24732806
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Tensorial elastic network model for protein dynamics: integration of the anisotropic network model with bond-bending and twist elasticities.
    Srivastava A; Halevi RB; Veksler A; Granek R
    Proteins; 2012 Dec; 80(12):2692-700. PubMed ID: 22847894
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Dynamics of proteins predicted by molecular dynamics simulations and analytical approaches: application to alpha-amylase inhibitor.
    Doruker P; Atilgan AR; Bahar I
    Proteins; 2000 Aug; 40(3):512-24. PubMed ID: 10861943
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A unification of the elastic network model and the Gaussian network model for optimal description of protein conformational motions and fluctuations.
    Zheng W
    Biophys J; 2008 May; 94(10):3853-7. PubMed ID: 18234807
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Multiscale Gaussian network model (mGNM) and multiscale anisotropic network model (mANM).
    Xia K; Opron K; Wei GW
    J Chem Phys; 2015 Nov; 143(20):204106. PubMed ID: 26627949
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The performance of fine-grained and coarse-grained elastic network models and its dependence on various factors.
    Na H; Song G
    Proteins; 2015 Jul; 83(7):1273-83. PubMed ID: 25917684
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Bridging between normal mode analysis and elastic network models.
    Na H; Song G
    Proteins; 2014 Sep; 82(9):2157-68. PubMed ID: 24692201
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The gaussian network model: precise prediction of residue fluctuations and application to binding problems.
    Erman B
    Biophys J; 2006 Nov; 91(10):3589-99. PubMed ID: 16935951
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Anisotropic fluctuations of amino acids in protein structures: insights from X-ray crystallography and elastic network models.
    Eyal E; Chennubhotla C; Yang LW; Bahar I
    Bioinformatics; 2007 Jul; 23(13):i175-84. PubMed ID: 17646294
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A complex multiscale virtual particle model based elastic network model (CMVP-ENM) for the normal mode analysis of biomolecular complexes.
    Anand DV; Meng Z; Xia K
    Phys Chem Chem Phys; 2019 Feb; 21(8):4359-4366. PubMed ID: 30724932
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Identification of Hot Spots in Protein Structures Using Gaussian Network Model and Gaussian Naive Bayes.
    Zhang H; Jiang T; Shan G
    Biomed Res Int; 2016; 2016():4354901. PubMed ID: 27882325
    [TBL] [Abstract][Full Text] [Related]  

  • 14. vGNM: a better model for understanding the dynamics of proteins in crystals.
    Song G; Jernigan RL
    J Mol Biol; 2007 Jun; 369(3):880-93. PubMed ID: 17451743
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Equally Weighted Multiscale Elastic Network Model and Its Comparison with Traditional and Parameter-Free Models.
    Gong W; Liu Y; Zhao Y; Wang S; Han Z; Li C
    J Chem Inf Model; 2021 Feb; 61(2):921-937. PubMed ID: 33496590
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Analysis of conformational motions and residue fluctuations for Escherichia coli ribose-binding protein revealed with elastic network models.
    Li HY; Cao ZX; Zhao LL; Wang JH
    Int J Mol Sci; 2013 May; 14(5):10552-69. PubMed ID: 23698778
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Separation of time scale and coupling in the motion governed by the coarse-grained and fine degrees of freedom in a polypeptide backbone.
    Murarka RK; Liwo A; Scheraga HA
    J Chem Phys; 2007 Oct; 127(15):155103. PubMed ID: 17949219
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Modeling Structural Dynamics of Biomolecular Complexes by Coarse-Grained Molecular Simulations.
    Takada S; Kanada R; Tan C; Terakawa T; Li W; Kenzaki H
    Acc Chem Res; 2015 Dec; 48(12):3026-35. PubMed ID: 26575522
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Conventional NMA as a better standard for evaluating elastic network models.
    Na H; Song G
    Proteins; 2015 Feb; 83(2):259-67. PubMed ID: 25471641
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Collective motions of rigid fragments in protein structures from smoothed electron density distributions.
    Leherte L; Vercauteren DP
    J Comput Chem; 2008 Jul; 29(9):1472-89. PubMed ID: 18270960
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.