152 related articles for article (PubMed ID: 24448113)
1. Folding and unfolding thermodynamics of the TC10b Trp-cage miniprotein.
English CA; García AE
Phys Chem Chem Phys; 2014 Feb; 16(7):2748-57. PubMed ID: 24448113
[TBL] [Abstract][Full Text] [Related]
2. Folding Thermodynamics and Mechanism of Five Trp-Cage Variants from Replica-Exchange MD Simulations with RSFF2 Force Field.
Zhou CY; Jiang F; Wu YD
J Chem Theory Comput; 2015 Nov; 11(11):5473-80. PubMed ID: 26574335
[TBL] [Abstract][Full Text] [Related]
3. Influence of water-protein hydrogen bonding on the stability of Trp-cage miniprotein. A comparison between the TIP3P and TIP4P-Ew water models.
Paschek D; Day R; García AE
Phys Chem Chem Phys; 2011 Nov; 13(44):19840-7. PubMed ID: 21845272
[TBL] [Abstract][Full Text] [Related]
4. Microsecond simulations of the folding/unfolding thermodynamics of the Trp-cage miniprotein.
Day R; Paschek D; Garcia AE
Proteins; 2010 Jun; 78(8):1889-99. PubMed ID: 20408169
[TBL] [Abstract][Full Text] [Related]
5. Protonation/deprotonation effects on the stability of the Trp-cage miniprotein.
Jimenez-Cruz CA; Makhatadze GI; Garcia AE
Phys Chem Chem Phys; 2011 Oct; 13(38):17056-63. PubMed ID: 21773639
[TBL] [Abstract][Full Text] [Related]
6. Folding dynamics of the Trp-cage miniprotein: evidence for a native-like intermediate from combined time-resolved vibrational spectroscopy and molecular dynamics simulations.
Meuzelaar H; Marino KA; Huerta-Viga A; Panman MR; Smeenk LE; Kettelarij AJ; van Maarseveen JH; Timmerman P; Bolhuis PG; Woutersen S
J Phys Chem B; 2013 Oct; 117(39):11490-501. PubMed ID: 24050152
[TBL] [Abstract][Full Text] [Related]
7. Replica exchange simulation of reversible folding/unfolding of the Trp-cage miniprotein in explicit solvent: on the structure and possible role of internal water.
Paschek D; Nymeyer H; García AE
J Struct Biol; 2007 Mar; 157(3):524-33. PubMed ID: 17293125
[TBL] [Abstract][Full Text] [Related]
8. VCD spectroscopic and molecular dynamics analysis of the Trp-cage miniprotein TC5b.
Copps J; Murphy RF; Lovas S
Biopolymers; 2007; 88(3):427-37. PubMed ID: 17326200
[TBL] [Abstract][Full Text] [Related]
9. Wang-Landau density of states based study of the folding-unfolding transition in the mini-protein Trp-cage (TC5b).
Singh P; Sarkar SK; Bandyopadhyay P
J Chem Phys; 2014 Jul; 141(1):015103. PubMed ID: 25005309
[TBL] [Abstract][Full Text] [Related]
10. Unfolding thermodynamics of Trp-cage, a 20 residue miniprotein, studied by differential scanning calorimetry and circular dichroism spectroscopy.
Streicher WW; Makhatadze GI
Biochemistry; 2007 Mar; 46(10):2876-80. PubMed ID: 17295518
[TBL] [Abstract][Full Text] [Related]
11. Possible locally driven folding pathways of TC5b, a 20-residue protein.
Nikiforovich GV; Andersen NH; Fesinmeyer RM; Frieden C
Proteins; 2003 Aug; 52(2):292-302. PubMed ID: 12833552
[TBL] [Abstract][Full Text] [Related]
12. Equilibrium study of protein denaturation by urea.
Canchi DR; Paschek D; García AE
J Am Chem Soc; 2010 Feb; 132(7):2338-44. PubMed ID: 20121105
[TBL] [Abstract][Full Text] [Related]
13. Computing the stability diagram of the Trp-cage miniprotein.
Paschek D; Hempel S; García AE
Proc Natl Acad Sci U S A; 2008 Nov; 105(46):17754-9. PubMed ID: 19004791
[TBL] [Abstract][Full Text] [Related]
14. Computational study of the stability of the miniprotein trp-cage, the GB1 β-hairpin, and the AK16 peptide, under negative pressure.
Hatch HW; Stillinger FH; Debenedetti PG
J Phys Chem B; 2014 Jul; 118(28):7761-9. PubMed ID: 24559466
[TBL] [Abstract][Full Text] [Related]
15. Charged Termini on the Trp-Cage Roughen the Folding Energy Landscape.
English CA; García AE
J Phys Chem B; 2015 Jun; 119(25):7874-81. PubMed ID: 26018669
[TBL] [Abstract][Full Text] [Related]
16. Cooperation between a salt bridge and the hydrophobic core triggers fold stabilization in a Trp-cage miniprotein.
Hudáky P; Stráner P; Farkas V; Váradi G; Tóth G; Perczel A
Biochemistry; 2008 Jan; 47(3):1007-16. PubMed ID: 18161949
[TBL] [Abstract][Full Text] [Related]
17. Understanding folding and design: replica-exchange simulations of "Trp-cage" miniproteins.
Pitera JW; Swope W
Proc Natl Acad Sci U S A; 2003 Jun; 100(13):7587-92. PubMed ID: 12808142
[TBL] [Abstract][Full Text] [Related]
18. Structural and thermodynamics characters of isolated α-syn12 peptide: long-time temperature replica-exchange molecular dynamics in aqueous solution.
Cao Z; Liu L; Wu P; Wang J
Acta Biochim Biophys Sin (Shanghai); 2011 Mar; 43(3):172-80. PubMed ID: 21289072
[TBL] [Abstract][Full Text] [Related]
19. Structural insights into the Trp-cage folding intermediate formation.
Rovó P; Stráner P; Láng A; Bartha I; Huszár K; Nyitray L; Perczel A
Chemistry; 2013 Feb; 19(8):2628-40. PubMed ID: 23319425
[TBL] [Abstract][Full Text] [Related]
20. A Computational Study of the Ionic Liquid-Induced Destabilization of the Miniprotein Trp-Cage.
Uralcan B; Kim SB; Markwalter CE; Prud'homme RK; Debenedetti PG
J Phys Chem B; 2018 May; 122(21):5707-5715. PubMed ID: 29617131
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]